RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TMEM204Q9BSN7 226 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 KCNIP2Q9NS61 270 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 IDI2-AS1Q9NZ38 188 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 HIGD1BQ9P298 99 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 PRR32B1ATL7 298 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 SNCGO76070 127 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 EML2O95834 649 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 GYPBP06028 91 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 ZNF688P0C7X2 276 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 AMY2BP19961 511 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 OPRK1P41145 380 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 NKX2-1P43699 371 aaPredicted RBP7.36□□□□□ -1.23
COMMD3-215ENST00000602574 MNX1P50219 401 aaPredicted RBP7.36□□□□□ -1.23
COMMD3-215ENST00000602574 TBC1D28Q2M2D7 210 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 PHLDA2Q53GA4 152 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 FAM182BQ5T319 152 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 ODF3L1Q8IXM7 274 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 RAB37Q96AX2 223 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 NDUFA7O95182 113 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 FCGR2AP12318 317 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 TAS2R45P59539 299 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 PRSS53Q2L4Q9 553 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 CBLN3Q6UW01 205 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 TMEM116Q8NCL8 245 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 RASL11BQ9BPW5 248 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 TRIP12Q14669 1992 aaPredicted RBP7.35□□□□□ -1.23
COMMD3-215ENST00000602574 A0A087WV48 116 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 LOC107984640A0A0U1RRK4 108 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 RBP4P02753 201 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 B4GALT1P15291 398 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 OR11H6Q8NGC7 330 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 BAALCQ8WXS3 180 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 PIGCQ92535 297 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 HILPDAQ9Y5L2 63 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 TMEM14AQ9Y6G1 99 aa7.35□□□□□ -1.23
COMMD3-215ENST00000602574 FAM90A18PA6NE21 464 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 FAM90A16PA6NEW6 464 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 FAM90A8PA6NJQ4 464 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 FAM90A9PA6NNJ1 464 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 TMEM14DPA8MWL7 114 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 OR2J3O76001 311 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 LYPD3O95274 346 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 EDN2P20800 178 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 MPV17P39210 176 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 TRIP6Q15654 476 aaKnown RBP7.34□□□□□ -1.23
COMMD3-215ENST00000602574 LINC01590Q5TEZ4 76 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 CFAP126Q5VTH2 177 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 MMD2Q8IY49 270 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 OCC1Q8TAD7 63 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 SLC37A2Q8TED4 501 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 FAM234AQ9H0X4 552 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 R3HDMLQ9H3Y0 253 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 PRORYQ9H606 182 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 TNFRSF19Q9NS68 423 aa7.34□□□□□ -1.23
COMMD3-215ENST00000602574 TRBV20-1A0A075B6N2 111 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 A0A1W2PR77 199 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 K7EN84 100 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 NBR2O15453 112 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 NAPSAO96009 420 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 COL9A1P20849 921 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 NMUP48645 174 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 UNC119Q13432 240 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 CXorf66Q5JRM2 361 aaPredicted RBP7.34□□□□□ -1.24
COMMD3-215ENST00000602574 C1orf140Q5VVS0 124 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 DUX4L9Q6RFH8 374 aaPredicted RBP7.34□□□□□ -1.24
COMMD3-215ENST00000602574 ACP7Q6ZNF0 438 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 OR1L4Q8NGR5 311 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 MAFAQ8NHW3 353 aaPredicted RBP7.34□□□□□ -1.24
COMMD3-215ENST00000602574 OTOSQ8NHW6 89 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 NMNAT3Q96T66 252 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 SIRPDQ9H106 197 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 PRNDQ9UKY0 176 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 MPC1Q9Y5U8 109 aa7.34□□□□□ -1.24
COMMD3-215ENST00000602574 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 IGLL5B9A064 214 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 C9JCJ5 164 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 NTN1O95631 604 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 TIMP1P01033 207 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 NPPCP23582 126 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 HSPE1P61604 102 aaKnown RBP7.33□□□□□ -1.24
COMMD3-215ENST00000602574 HES1Q14469 280 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 LYZL2Q7Z4W2 148 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 TEN1Q86WV5 123 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 KIR3DL3Q8N743 410 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 OR4C13Q8NGP0 309 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 OR2T6Q8NHC8 308 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 ZPLD1Q8TCW7 415 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 LRRC29Q8WV35 223 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 LINC00479Q96M42 142 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 DNAJB12Q9NXW2 375 aaKnown RBP7.33□□□□□ -1.24
COMMD3-215ENST00000602574 PROCRQ9UNN8 238 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 SELENOKQ9Y6D0 94 aa7.33□□□□□ -1.24
COMMD3-215ENST00000602574 MDC1Q14676 2089 aaKnown RBP7.33□□□□□ -1.24
COMMD3-215ENST00000602574 DUSP14O95147 198 aaKnown RBP7.32□□□□□ -1.24
COMMD3-215ENST00000602574 IGLC6P0CF74 106 aa7.32□□□□□ -1.24
COMMD3-215ENST00000602574 ZNF415Q09FC8 603 aa7.32□□□□□ -1.24
COMMD3-215ENST00000602574 WDR38Q5JTN6 314 aa7.32□□□□□ -1.24
COMMD3-215ENST00000602574 PPP1R32Q7Z5V6 425 aa7.32□□□□□ -1.24
COMMD3-215ENST00000602574 C8orf44Q96CB5 159 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms