RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	C11orf94	C9JXX5	98 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	PTGES3L	E9PB15	166 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	UPK2	O00526	184 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	CASQ2	O14958	399 aa	Predicted RBP	13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	CMC4	P56277	68 aa	Predicted RBP	13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	TAS2R31	P59538	309 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190		Q8NAQ8	132 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	OR10C1	Q96KK4	312 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	GPHA2	Q96T91	129 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	AIFM2	Q9BRQ8	373 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	TAS2R8	Q9NYW2	309 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	SMPX	Q9UHP9	88 aa		13.33	□□□□□ -0.28
IRF3-231	ENST00000602190	METTL21EP	A6NDL7	271 aa		13.32	□□□□□ -0.28
IRF3-231	ENST00000602190	OR2T8	A6NH00	312 aa		13.32	□□□□□ -0.28
IRF3-231	ENST00000602190	RPA2	P15927	270 aa		13.32	□□□□□ -0.28
IRF3-231	ENST00000602190	WT1-AS	Q06250	92 aa		13.32	□□□□□ -0.28
IRF3-231	ENST00000602190	NR2C2AP	Q86WQ0	139 aa		13.32	□□□□□ -0.28
IRF3-231	ENST00000602190	RNF2	Q99496	336 aa		13.32	□□□□□ -0.28
IRF3-231	ENST00000602190	ANXA10	Q9UJ72	324 aa		13.32	□□□□□ -0.28
IRF3-231	ENST00000602190		K7EIM0	57 aa		13.31	□□□□□ -0.28
IRF3-231	ENST00000602190	CHEK1	O14757	476 aa		13.31	□□□□□ -0.28
IRF3-231	ENST00000602190	SSX5	O60225	188 aa		13.31	□□□□□ -0.28
IRF3-231	ENST00000602190	SERPINE2	P07093	398 aa		13.31	□□□□□ -0.28
IRF3-231	ENST00000602190	CDNF	Q49AH0	187 aa		13.31	□□□□□ -0.28
IRF3-231	ENST00000602190	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.31	□□□□□ -0.28
IRF3-231	ENST00000602190	CADM3	Q8N126	398 aa		13.31	□□□□□ -0.28
IRF3-231	ENST00000602190	OR10W1	Q8NGF6	305 aa		13.31	□□□□□ -0.28
IRF3-231	ENST00000602190	SCARB1	Q8WTV0	552 aa		13.31	□□□□□ -0.28
IRF3-231	ENST00000602190	QTRT1	Q9BXR0	403 aa	Known RBP	13.31	□□□□□ -0.28
IRF3-231	ENST00000602190	SPAG16	Q8N0X2	631 aa		13.3	□□□□□ -0.28
IRF3-231	ENST00000602190	ZBTB34	Q8NCN2	500 aa		13.3	□□□□□ -0.28
IRF3-231	ENST00000602190	MGLL	Q99685	303 aa		13.3	□□□□□ -0.28
IRF3-231	ENST00000602190	C21orf62	Q9NYP8	219 aa		13.3	□□□□□ -0.28
IRF3-231	ENST00000602190	F11R	Q9Y624	299 aa	Known RBP	13.3	□□□□□ -0.28
IRF3-231	ENST00000602190	IGHV7-4-1	A0A0J9YVY3	117 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	C15orf61	A6NNL5	157 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	PDCD5	O14737	125 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	RTL8C	O15255	209 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	HPRT1	P00492	218 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	CTSG	P08311	255 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	GIG44	P09565	113 aa	Predicted RBP	13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	NQO2	P16083	231 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	NUDCD2	Q8WVJ2	157 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	RHPN1-AS1	Q9BWJ2	59 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	KRTAP4-5	Q9BYR2	181 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	COMMD5	Q9GZQ3	224 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	PLEKHA2	Q9HB19	425 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	HRASLS	Q9HDD0	168 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	CCL28	Q9NRJ3	127 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	NDUFA4L2	Q9NRX3	87 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	SCN3B	Q9NY72	215 aa		13.29	□□□□□ -0.28
IRF3-231	ENST00000602190	IGLL5	B9A064	214 aa		13.28	□□□□□ -0.28
IRF3-231	ENST00000602190	HSMCR30	P0CW71	290 aa		13.28	□□□□□ -0.28
IRF3-231	ENST00000602190	TMEM140	Q9NV12	185 aa		13.28	□□□□□ -0.28
IRF3-231	ENST00000602190	IGHV3OR16-8	A0A075B7F1	116 aa		13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	TMEM235	A6NFC5	223 aa		13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	DEFB4A	O15263	64 aa		13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	CYB5B	O43169	146 aa		13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	RBMY1A1	P0DJD3	496 aa	Known RBP	13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	RBMY1C	P0DJD4	496 aa		13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	OR13C7	P0DN81	318 aa		13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	TMEM187	Q14656	261 aa		13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	RBMY1F	Q15415	496 aa	Known RBP	13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	DGCR14	Q96DF8	476 aa	Known RBP	13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	C20orf24	Q9BUV8	137 aa		13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	ATG5	Q9H1Y0	275 aa		13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	AGRN	O00468	2067 aa		13.27	□□□□□ -0.29
IRF3-231	ENST00000602190	TEX50	A0A1B0GTY4	177 aa		13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	TNFSF12	O43508	249 aa		13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	ZNF207	O43670	478 aa	Known RBP	13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	MRPS14	O60783	128 aa	Known RBP	13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	TRAPPC2	P0DI81	140 aa		13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	TRAPPC2B	P0DI82	140 aa		13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	RAB3B	P20337	219 aa		13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	PRSS48	Q7RTY5	328 aa		13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	TMEM116	Q8NCL8	245 aa		13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	OR13F1	Q8NGS4	319 aa		13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	RNF126	Q9BV68	326 aa		13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	COMMD9	Q9P000	198 aa		13.26	□□□□□ -0.29
IRF3-231	ENST00000602190	IGHV4-4	A0A075B6R2	117 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	TRAV2	A0A0B4J234	112 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	TRDV1	A0A1B0GX56	115 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	DFFB	O76075	338 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	CA1	P00915	261 aa	Predicted RBP	13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	PPY	P01298	95 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	AMBP	P02760	352 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	RCN1	Q15293	331 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	SLC25A24	Q6NUK1	477 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	OR1L8	Q8NGR8	309 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	LSM10	Q969L4	123 aa	Known RBP	13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	VSIR	Q9H7M9	311 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	TPRKB	Q9Y3C4	175 aa		13.25	□□□□□ -0.29
IRF3-231	ENST00000602190	TRAV10	A0A0B4J240	114 aa		13.24	□□□□□ -0.29
IRF3-231	ENST00000602190	SULT1C2	O00338	296 aa		13.24	□□□□□ -0.29
IRF3-231	ENST00000602190	RGS10	O43665	173 aa		13.24	□□□□□ -0.29
IRF3-231	ENST00000602190	CATR1	Q13166	79 aa		13.24	□□□□□ -0.29
IRF3-231	ENST00000602190	TBCE	Q15813	527 aa	Predicted RBP	13.24	□□□□□ -0.29
IRF3-231	ENST00000602190	SECTM1	Q8WVN6	248 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms