RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 IAH1Q2TAA2 248 aaPredicted RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 TMEM268Q5VZI3 342 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 ADAMTSL5Q6ZMM2 481 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 SBSPONQ8IVN8 264 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 CLRN3Q8NCR9 226 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 ADAD2Q8NCV1 583 aaKnown RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 OR10V1Q8NGI7 309 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 CASTOR1Q8WTX7 329 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 C4orf3Q8WVX3 66 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 CORO2AQ92828 525 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 COQ2Q96H96 371 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 EAF1Q96JC9 268 aaPredicted RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 OR4C12Q96R67 309 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 ZNF2Q9BSG1 426 aaPredicted RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 RNF126Q9BV68 326 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 NKX6-2Q9C056 277 aaPredicted RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 SLC5A7Q9GZV3 580 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 NAA60Q9H7X0 242 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 TAF9BQ9HBM6 251 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 CYTL1Q9NRR1 136 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 LIN7CQ9NUP9 197 aaKnown RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 RCC2Q9P258 522 aaKnown RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 TMA7Q9Y2S6 64 aaKnown RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 WSB1Q9Y6I7 421 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 LCE6AA0A183 80 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 TMEM30CPA0ZSE6 113 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 LY6LH3BQJ8 138 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 CCSO14618 274 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 ST8SIA3O43173 380 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 OR7C1O76099 320 aaPredicted RBP4.06□□□□□ -1.76
VRK3-226ENST00000602029 NAPSAO96009 420 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 IGHG2P01859 326 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 APOC3P02656 99 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 MBPP02686 304 aaPredicted RBP4.06□□□□□ -1.76
VRK3-226ENST00000602029 CSN2P05814 226 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 RPL12P30050 165 aaKnown RBP4.06□□□□□ -1.76
VRK3-226ENST00000602029 INSL3P51460 131 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 RAB32Q13637 225 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 TMEM187Q14656 261 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 GUCA2BQ16661 112 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 ANKRD55Q3KP44 614 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 PIGYQ3MUY2 71 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 LRRC37A5PQ49AS3 106 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 UTF1Q5T230 341 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 DPPA3Q6W0C5 159 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 ZNF429Q86V71 674 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 TGIF2LXQ8IUE1 241 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 RTN4IP1Q8WWV3 396 aaPredicted RBP4.06□□□□□ -1.76
VRK3-226ENST00000602029 ARPC1AQ92747 370 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 SEC22AQ96IW7 307 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 TMEM56Q96MV1 263 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 S1PR3Q99500 378 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 TSNAXQ99598 290 aaKnown RBP4.06□□□□□ -1.76
VRK3-226ENST00000602029 ZNF251Q9BRH9 671 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 GINS3Q9BRX5 216 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 PBDC1Q9BVG4 233 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 ST6GALNAC5Q9BVH7 336 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 ELOVL1Q9BW60 279 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 SLC25A31Q9H0C2 315 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 BANF2Q9H503 90 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 TUBA4BQ9H853 241 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 ZNF355PQ9NSJ1 428 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 UQCC1Q9NVA1 299 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 KIAA1456Q9P272 454 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 ZNF230Q9UIE0 474 aaPredicted RBP4.06□□□□□ -1.76
VRK3-226ENST00000602029 TRAPPC2LQ9UL33 140 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 RNF150Q9ULK6 438 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 ST3GAL6Q9Y274 331 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 LSM4Q9Y4Z0 139 aaKnown RBP4.06□□□□□ -1.76
VRK3-226ENST00000602029 TMEM56-RWDD3S4R434 201 aa4.06□□□□□ -1.76
VRK3-226ENST00000602029 A0A087X0M5 115 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 TRAV41A0A0B4J266 112 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 IGKV1-12A0A0C4DH73 117 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 C13orf42A0A1B0GVH6 325 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 A0A1B0GX30 115 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 A0A1W2PP11 408 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 ZNF705EA8MWA4 302 aaPredicted RBP4.05□□□□□ -1.76
VRK3-226ENST00000602029 H0YIZ8 118 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 H7C2Y5 167 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 DNASE2O00115 360 aaPredicted RBP4.05□□□□□ -1.76
VRK3-226ENST00000602029 SPINT2O43291 252 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 HSPA12AO43301 675 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 SLC25A17O43808 307 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 SOX15O60248 233 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 PPYP01298 95 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 IGKV1D-12P01611 117 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 IGHV3-11P01762 117 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 CD5P06127 495 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 SPP1P10451 314 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 FOLR2P14207 255 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 GP9P14770 177 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 UCP1P25874 307 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 CDX1P47902 265 aaPredicted RBP4.05□□□□□ -1.76
VRK3-226ENST00000602029 SLURP1P55000 103 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 PIGPP57054 158 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 GNMTQ14749 295 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 PEA15Q15121 130 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 GGNBP1Q5YKI7 109 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 FAM53AQ6NSI3 398 aaPredicted RBP4.05□□□□□ -1.76
VRK3-226ENST00000602029 C6orf201Q7Z4U5 140 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms