RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 TRAV3A0A0B4J244 114 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 A0A1B0GW64 132 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 CGB1A6NKQ9 187 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 DBX1A6NMT0 343 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 SLC25A17O43808 307 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 IGHG2P01859 326 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 FGF2P09038 288 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 SAA1P0DJI8 122 aaPredicted RBP6.86□□□□□ -1.31
TRIM28-214ENST00000600840 IGLL1P15814 213 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 NQO2P16083 231 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 EIF5AP63241 154 aaKnown RBP6.86□□□□□ -1.31
TRIM28-214ENST00000600840 HES1Q14469 280 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 MMDQ15546 238 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 AARDQ4LEZ3 155 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 C19orf54Q5BKX5 351 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 OR4A47Q6IF82 309 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 TMUB2Q71RG4 321 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 TMED4Q7Z7H5 227 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 CCDC28AQ8IWP9 274 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 SGPP2Q8IWX5 399 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 THAP6Q8TBB0 222 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 IL22RA2Q969J5 263 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 HARBI1Q96MB7 349 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 TSNAXQ99598 290 aaKnown RBP6.86□□□□□ -1.31
TRIM28-214ENST00000600840 HSPB9Q9BQS6 159 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 PDCD10Q9BUL8 212 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 NMES1Q9C002 83 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 MFFQ9GZY8 342 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 FBXL15Q9H469 300 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 LIN7CQ9NUP9 197 aaKnown RBP6.86□□□□□ -1.31
TRIM28-214ENST00000600840 GAR1Q9NY12 217 aaKnown RBP6.86□□□□□ -1.31
TRIM28-214ENST00000600840 BET1LQ9NYM9 111 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 PFDN2Q9UHV9 154 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 KCNIP3Q9Y2W7 256 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 MOB4Q9Y3A3 225 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 EPPK1P58107 5090 aaKnown RBP6.85□□□□□ -1.31
TRIM28-214ENST00000600840 FXYD6-FXYD2A0A087WZ82 144 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 KANTRA0A1W2PQU2 76 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 MARCH11A6NNE9 402 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 E7EUB6 86 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 M0QZK8 103 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 UPK2O00526 184 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 SHOXO15266 292 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 HRASP01112 189 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 KRASP01116 189 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 HLA-DRB1P01911 266 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 OR9G9P0C7N8 305 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 M6PRP20645 277 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 S100GP29377 79 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 G6PCP35575 357 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 NUP62P37198 522 aaPredicted RBP6.85□□□□□ -1.31
TRIM28-214ENST00000600840 CRIP2P52943 208 aaPredicted RBP6.85□□□□□ -1.31
TRIM28-214ENST00000600840 H2BFSP57053 126 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 CX3CL1P78423 397 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 NDPQ00604 133 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 PRSS8Q16651 343 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 IZUMO4Q1ZYL8 232 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 ARSJQ5FYB0 599 aaPredicted RBP6.85□□□□□ -1.31
TRIM28-214ENST00000600840 NMSQ5H8A3 153 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 GSG1LQ6UXU4 331 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 ZNF562Q6V9R5 426 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 LYZL2Q7Z4W2 148 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 PPP1R27Q86WC6 154 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 OR52B4Q8NGK2 314 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 GPR146Q96CH1 333 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 ARL6Q9H0F7 186 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 SLC25A32Q9H2D1 315 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 ZFP57Q9NU63 452 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 METTL1Q9UBP6 276 aaKnown RBP6.85□□□□□ -1.31
TRIM28-214ENST00000600840 FBXO7Q9Y3I1 522 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 DNAH3Q8TD57 4116 aa6.85□□□□□ -1.31
TRIM28-214ENST00000600840 RPS10-NUDT3A0A1W2PQS6 291 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 NCBP2LA6PVI3 153 aaKnown RBP6.84□□□□□ -1.31
TRIM28-214ENST00000600840 NUDT19A8MXV4 375 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 ARPC5O15511 151 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 PITX3O75364 302 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 KBTBD11O94819 623 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 MPC2O95563 127 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 IGF1P05019 195 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 SERPINE2P07093 398 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 MYOD1P15172 320 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 CXCL2P19875 107 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 KRTAP10-11P60412 298 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 ASPHD1Q5U4P2 390 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 ACOT7LQ6ZUV0 252 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 CENPVQ7Z7K6 275 aaPredicted RBP6.84□□□□□ -1.31
TRIM28-214ENST00000600840 ZNF546Q86UE3 836 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 KCNRGQ8N5I3 272 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 EIF4E3Q8N5X7 224 aaKnown RBP6.84□□□□□ -1.31
TRIM28-214ENST00000600840 SLC35G3Q8N808 338 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 INO80EQ8NBZ0 244 aaPredicted RBP6.84□□□□□ -1.31
TRIM28-214ENST00000600840 WFDC9Q8NEX5 89 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 OR4F17Q8NGA8 305 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 OR4A5Q8NH83 315 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 RBPMSQ93062 196 aaKnown RBP6.84□□□□□ -1.31
TRIM28-214ENST00000600840 LSM10Q969L4 123 aaKnown RBP6.84□□□□□ -1.31
TRIM28-214ENST00000600840 OR4F4Q96R69 305 aa6.84□□□□□ -1.31
TRIM28-214ENST00000600840 ZNF430Q9H8G1 570 aaPredicted RBP6.84□□□□□ -1.31
TRIM28-214ENST00000600840 TMEM140Q9NV12 185 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms