RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 WFDC12Q8WWY7 111 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 SPIN2AQ99865 258 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 SPIN2BQ9BPZ2 258 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 HINT2Q9BX68 163 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 NDUFA4L2Q9NRX3 87 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 FKBP11Q9NYL4 201 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 ZNF257Q9Y2Q1 563 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 ALG5Q9Y673 324 aa15.68■□□□□ 0.1
SHKBP1-222ENST00000600320 A0A1W2PN81 502 aa15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 IGLC7A0M8Q6 106 aa15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 PITX3O75364 302 aa15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 NXPH3O95157 252 aa15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 TRAPPC2P0DI81 140 aa15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 TRAPPC2BP0DI82 140 aa15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 CHRNA7P36544 502 aa15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 HSPE1P61604 102 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 SRSF4Q08170 494 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 TMEM267Q0VDI3 215 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 AKIRIN2Q53H80 203 aa15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 MINDY2Q8NBR6 621 aa15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 OR5T1Q8NG75 326 aa15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-222ENST00000600320 A0A1B0GU03 582 aa15.66■□□□□ 0.1
SHKBP1-222ENST00000600320 PRCDQ00LT1 54 aa15.66■□□□□ 0.1
SHKBP1-222ENST00000600320 C19orf35Q6ZS72 473 aa15.66■□□□□ 0.1
SHKBP1-222ENST00000600320 C11orf44Q8N8P7 122 aa15.66■□□□□ 0.1
SHKBP1-222ENST00000600320 OR5AU1Q8NGC0 362 aa15.66■□□□□ 0.1
SHKBP1-222ENST00000600320 COA4Q9NYJ1 87 aa15.66■□□□□ 0.1
SHKBP1-222ENST00000600320 IFNA21P01568 189 aa15.65■□□□□ 0.1
SHKBP1-222ENST00000600320 REG1AP05451 166 aa15.65■□□□□ 0.1
SHKBP1-222ENST00000600320 SLC25A6P12236 298 aa15.65■□□□□ 0.1
SHKBP1-222ENST00000600320 SLC35B1P78383 322 aa15.65■□□□□ 0.1
SHKBP1-222ENST00000600320 WT1-ASQ06250 92 aa15.65■□□□□ 0.1
SHKBP1-222ENST00000600320 TCTEX1D4Q5JR98 221 aa15.65■□□□□ 0.1
SHKBP1-222ENST00000600320 LCNL1Q6ZST4 164 aa15.65■□□□□ 0.1
SHKBP1-222ENST00000600320 SPATA3Q8NHX4 192 aa15.65■□□□□ 0.1
SHKBP1-222ENST00000600320 OR10C1Q96KK4 312 aa15.65■□□□□ 0.1
SHKBP1-222ENST00000600320 IFNA17P01571 189 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 IGLV1-40P01703 118 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 IGHG4P01861 327 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 CD28P10747 220 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 THOC7Q6I9Y2 204 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 C11orf87Q6NUJ2 197 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 C12orf54Q6X4T0 127 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 OR52E5Q8NH55 327 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 OR1S1Q8NH92 325 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 FAM110DQ8TAY7 271 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 TMEM68Q96MH6 324 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 SRSF8Q9BRL6 282 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 PDCD10Q9BUL8 212 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 GON7Q9BXV9 100 aa15.64■□□□□ 0.09
SHKBP1-222ENST00000600320 PSMB6P28072 239 aa15.63■□□□□ 0.09
SHKBP1-222ENST00000600320 SPCS3P61009 180 aa15.63■□□□□ 0.09
SHKBP1-222ENST00000600320 CXorf66Q5JRM2 361 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-222ENST00000600320 TTC9CQ8N5M4 171 aa15.63■□□□□ 0.09
SHKBP1-222ENST00000600320 KLK15Q9H2R5 256 aa15.63■□□□□ 0.09
SHKBP1-222ENST00000600320 C13orf42A0A1B0GVH6 325 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 NPIPB5A8MRT5 1133 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 FBXO24O75426 580 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 PRH1P02810 166 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 CRYGCP07315 174 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 OR13C7P0DN81 318 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 CTRB1P17538 263 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 PSMB8P28062 276 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 IAH1Q2TAA2 248 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 PDLIM3Q53GG5 364 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 CTRB2Q6GPI1 263 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 TEX38Q6PEX7 206 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 ZBTB8BQ8NAP8 495 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 OR4D5Q8NGN0 318 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 OR5M8Q8NGP6 311 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 PLEKHA3Q9HB20 300 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 HSPB7Q9UBY9 170 aa15.62■□□□□ 0.09
SHKBP1-222ENST00000600320 FAM25EA8MYX2 175 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 GOSR2O14653 212 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 SSNA1O43805 119 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 SIX6O95475 246 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 ELANEP08246 267 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 PF4V1P10720 104 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 TNFRSF9Q07011 255 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 FOXE3Q13461 319 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 OR2C3Q8N628 320 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 COMMD1Q8N668 190 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 OR4X2Q8NGF9 303 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 MS4A10Q96PG2 267 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 ZNF747Q9BV97 191 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 RBKSQ9H477 322 aa15.61■□□□□ 0.09
SHKBP1-222ENST00000600320 C5orf51A6NDU8 294 aa15.6■□□□□ 0.09
SHKBP1-222ENST00000600320 RPLP1P05386 114 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-222ENST00000600320 HOXA1P49639 335 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-222ENST00000600320 CD83Q01151 205 aa15.6■□□□□ 0.09
SHKBP1-222ENST00000600320 DEFA5Q01523 94 aa15.6■□□□□ 0.09
SHKBP1-222ENST00000600320 HSD17B13Q7Z5P4 300 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-222ENST00000600320 RNF152Q8N8N0 203 aa15.6■□□□□ 0.09
SHKBP1-222ENST00000600320 CITED1Q99966 193 aa15.6■□□□□ 0.09
SHKBP1-222ENST00000600320 CITED2Q99967 270 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-222ENST00000600320 ZNF355PQ9NSJ1 428 aa15.6■□□□□ 0.09
SHKBP1-222ENST00000600320 CEBPZOSA8MTT3 80 aa15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 INS-IGF2F8WCM5 200 aa15.59■□□□□ 0.09
SHKBP1-222ENST00000600320 MFAP2P55001 183 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms