RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 AARDQ4LEZ3 155 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 ZNF329Q86UD4 541 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 ZNF429Q86V71 674 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 OR1L8Q8NGR8 309 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 OR5B3Q8NH48 314 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 FYTTD1Q96QD9 318 aaKnown RBP14.74□□□□□ -0.05
CCDC9-205ENST00000600117 SPIN2AQ99865 258 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 CITED1Q99966 193 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 SPIN2BQ9BPZ2 258 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 QTRT1Q9BXR0 403 aaKnown RBP14.74□□□□□ -0.05
CCDC9-205ENST00000600117 FKBP11Q9NYL4 201 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 CACNG5Q9UF02 275 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 PRAF2O60831 178 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 ADAP1O75689 374 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 IGHG4P01861 327 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 APELAP0DMC3 54 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 GGNBP1Q5YKI7 109 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 OR5AU1Q8NGC0 362 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 TMEM68Q96MH6 324 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 GON7Q9BXV9 100 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 NDUFA4L2Q9NRX3 87 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 ZNF257Q9Y2Q1 563 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 TMED3Q9Y3Q3 217 aa14.73□□□□□ -0.05
CCDC9-205ENST00000600117 IGLC7A0M8Q6 106 aa14.72□□□□□ -0.05
CCDC9-205ENST00000600117 ST8SIA3O43173 380 aa14.72□□□□□ -0.05
CCDC9-205ENST00000600117 IGLV1-40P01703 118 aa14.72□□□□□ -0.05
CCDC9-205ENST00000600117 HOXB5P09067 269 aa14.72□□□□□ -0.05
CCDC9-205ENST00000600117 TRAPPC2P0DI81 140 aa14.72□□□□□ -0.05
CCDC9-205ENST00000600117 TRAPPC2BP0DI82 140 aa14.72□□□□□ -0.05
CCDC9-205ENST00000600117 HSPE1P61604 102 aaKnown RBP14.72□□□□□ -0.05
CCDC9-205ENST00000600117 SLC35B1P78383 322 aa14.72□□□□□ -0.05
CCDC9-205ENST00000600117 TCTEX1D4Q5JR98 221 aa14.72□□□□□ -0.05
CCDC9-205ENST00000600117 PHB2Q99623 299 aa14.72□□□□□ -0.05
CCDC9-205ENST00000600117 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.72□□□□□ -0.05
CCDC9-205ENST00000600117 COA4Q9NYJ1 87 aa14.72□□□□□ -0.05
CCDC9-205ENST00000600117 DNAH3Q8TD57 4116 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 A0A1B0GU03 582 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 A0A1W2PN81 502 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 DHFRP00374 187 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 SULT1A3P0DMM9 295 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 SULT1A4P0DMN0 295 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 CD28P10747 220 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 AREGP15514 252 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 CHRNA7P36544 502 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 OXA1LQ15070 435 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 THOC7Q6I9Y2 204 aaKnown RBP14.71□□□□□ -0.05
CCDC9-205ENST00000600117 C12orf45Q8N5I9 185 aaPredicted RBP14.71□□□□□ -0.05
CCDC9-205ENST00000600117 RNF152Q8N8N0 203 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 OR10W1Q8NGF6 305 aa14.71□□□□□ -0.05
CCDC9-205ENST00000600117 FAM110DQ8TAY7 271 aaPredicted RBP14.71□□□□□ -0.05
CCDC9-205ENST00000600117 SRSF8Q9BRL6 282 aaKnown RBP14.71□□□□□ -0.05
CCDC9-205ENST00000600117 MPTX1A8MV57 137 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 SNRPGP15A8MWD9 76 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 PITX3O75364 302 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 RBMXL2O75526 392 aaKnown RBP14.7□□□□□ -0.06
CCDC9-205ENST00000600117 SLC25A6P12236 298 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 PSMB8P28062 276 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 PRCDQ00LT1 54 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 FOXE3Q13461 319 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 SMCO1Q147U7 214 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 TEX38Q6PEX7 206 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 C1QL4Q86Z23 238 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 TTC9CQ8N5M4 171 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 COMMD1Q8N668 190 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 C11orf44Q8N8P7 122 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 OR5T1Q8NG75 326 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 OR5M8Q8NGP6 311 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 HINT2Q9BX68 163 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 GPN1Q9HCN4 374 aaPredicted RBP14.7□□□□□ -0.06
CCDC9-205ENST00000600117 TENM3Q9P273 2699 aa14.7□□□□□ -0.06
CCDC9-205ENST00000600117 C7orf66A4D0T2 115 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 NPIPB5A8MRT5 1133 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 FBXO24O75426 580 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 ELANEP08246 267 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 CD83Q01151 205 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 WT1-ASQ06250 92 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 C19orf35Q6ZS72 473 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 LCNL1Q6ZST4 164 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 OR4X2Q8NGF9 303 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 OR52E5Q8NH55 327 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 KLK15Q9H2R5 256 aa14.69□□□□□ -0.06
CCDC9-205ENST00000600117 CRYGCP07315 174 aa14.68□□□□□ -0.06
CCDC9-205ENST00000600117 CTRB1P17538 263 aa14.68□□□□□ -0.06
CCDC9-205ENST00000600117 PSMB6P28072 239 aa14.68□□□□□ -0.06
CCDC9-205ENST00000600117 TATDN3Q17R31 274 aa14.68□□□□□ -0.06
CCDC9-205ENST00000600117 SPINK9Q5DT21 86 aa14.68□□□□□ -0.06
CCDC9-205ENST00000600117 CTRB2Q6GPI1 263 aa14.68□□□□□ -0.06
CCDC9-205ENST00000600117 MYOZ3Q8TDC0 251 aa14.68□□□□□ -0.06
CCDC9-205ENST00000600117 CITED2Q99967 270 aaPredicted RBP14.68□□□□□ -0.06
CCDC9-205ENST00000600117 H3BUA1 57 aa14.67□□□□□ -0.06
CCDC9-205ENST00000600117 BRI3O95415 125 aa14.67□□□□□ -0.06
CCDC9-205ENST00000600117 IFNA21P01568 189 aa14.67□□□□□ -0.06
CCDC9-205ENST00000600117 IFNA17P01571 189 aa14.67□□□□□ -0.06
CCDC9-205ENST00000600117 REG1AP05451 166 aa14.67□□□□□ -0.06
CCDC9-205ENST00000600117 SPCS3P61009 180 aa14.67□□□□□ -0.06
CCDC9-205ENST00000600117 KIAA0141Q14154 515 aaPredicted RBP14.67□□□□□ -0.06
CCDC9-205ENST00000600117 C2orf68Q2NKX9 166 aa14.67□□□□□ -0.06
CCDC9-205ENST00000600117 HSD17B13Q7Z5P4 300 aaPredicted RBP14.67□□□□□ -0.06
CCDC9-205ENST00000600117 HSPB7Q9UBY9 170 aa14.67□□□□□ -0.06
CCDC9-205ENST00000600117 INS-IGF2F8WCM5 200 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms