RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 OR51M1Q9H341 326 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 PRO1933Q9H354 126 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 CGB1A6NKQ9 187 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 CD24P25063 80 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 RELQ04864 619 aaPredicted RBP12.28□□□□□ -0.44
SYMPK-213ENST00000599460 ZNF738Q8NE65 137 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 IL4P05112 153 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 MPZP25189 248 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 ADIPOQQ15848 244 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 TM4SF20Q53R12 229 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 VAMP8Q9BV40 100 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 SRD5A3Q9H8P0 318 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 YAE1D1Q9NRH1 226 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 CACNA1GO43497 2377 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 SRSF7Q16629 238 aaKnown RBP eCLIP12.28□□□□□ -0.44
SYMPK-213ENST00000599460 TMEM78Q5T7P6 136 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 EBLN2Q6P2I7 272 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 COL6A6A6NMZ7 2263 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 PHF3Q92576 2039 aaKnown RBP12.28□□□□□ -0.44
SYMPK-213ENST00000599460 WT1P19544 449 aaPredicted RBP12.28□□□□□ -0.44
SYMPK-213ENST00000599460 RIGQ13278 110 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 OR10J6PQ8NGY7 276 aa12.28□□□□□ -0.44
SYMPK-213ENST00000599460 A0A087X0M5 115 aa12.27□□□□□ -0.44
SYMPK-213ENST00000599460 A0A1B0GX30 115 aa12.27□□□□□ -0.44
SYMPK-213ENST00000599460 H3BTX0 84 aa12.27□□□□□ -0.44
SYMPK-213ENST00000599460 TCAPO15273 167 aa12.27□□□□□ -0.44
SYMPK-213ENST00000599460 TMEM200BQ69YZ2 307 aa12.27□□□□□ -0.44
SYMPK-213ENST00000599460 NHLRC2Q8NBF2 726 aa12.27□□□□□ -0.44
SYMPK-213ENST00000599460 RARRES2Q99969 163 aa12.27□□□□□ -0.44
SYMPK-213ENST00000599460 NPCDR1Q9BY65 106 aa12.27□□□□□ -0.44
SYMPK-213ENST00000599460 NBR2O15453 112 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 TNFSF13O75888 250 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 HSPB1P04792 205 aaKnown RBP12.27□□□□□ -0.45
SYMPK-213ENST00000599460 ZNF273Q14593 569 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 COX19Q49B96 90 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 C20orf204Q6ZNR8 217 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 CYP2G1PQ6ZSU1 146 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 FBXL7Q9UJT9 491 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 J3QR89 54 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 UPK2O00526 184 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 IL6RP08887 468 aaPredicted RBP12.27□□□□□ -0.45
SYMPK-213ENST00000599460 TXNDC17Q9BRA2 123 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 C19orf24Q9BVV8 132 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 NPPCP23582 126 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 DUTP33316 252 aaKnown RBP12.27□□□□□ -0.45
SYMPK-213ENST00000599460 OR4C5Q8NGB2 326 aa12.27□□□□□ -0.45
SYMPK-213ENST00000599460 RTTNQ86VV8 2226 aa12.26□□□□□ -0.45
SYMPK-213ENST00000599460 QRFPP83859 136 aa12.26□□□□□ -0.45
SYMPK-213ENST00000599460 PSMG3Q9BT73 122 aaPredicted RBP12.26□□□□□ -0.45
SYMPK-213ENST00000599460 OBSL1O75147 1896 aa12.26□□□□□ -0.45
SYMPK-213ENST00000599460 M0R143 59 aa12.26□□□□□ -0.45
SYMPK-213ENST00000599460 TFF3Q07654 80 aa12.26□□□□□ -0.45
SYMPK-213ENST00000599460 COLCA1Q6ZS62 124 aa12.26□□□□□ -0.45
SYMPK-213ENST00000599460 SNRNP200O75643 2136 aaKnown RBP12.26□□□□□ -0.45
SYMPK-213ENST00000599460 E7EQL1 145 aa12.26□□□□□ -0.45
SYMPK-213ENST00000599460 HNRNPA3P51991 378 aaKnown RBP12.26□□□□□ -0.45
SYMPK-213ENST00000599460 LINC00305Q7Z4B0 112 aa12.26□□□□□ -0.45
SYMPK-213ENST00000599460 GGACTQ9BVM4 153 aa12.26□□□□□ -0.45
SYMPK-213ENST00000599460 MRPL32Q9BYC8 188 aaKnown RBP12.26□□□□□ -0.45
SYMPK-213ENST00000599460 ZNF581Q9P0T4 197 aa12.26□□□□□ -0.45
SYMPK-213ENST00000599460 IGFBP2P18065 325 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 HOXA4Q00056 320 aaPredicted RBP12.25□□□□□ -0.45
SYMPK-213ENST00000599460 PSG9Q00887 426 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 OR2D3Q8NGH3 330 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 FOXA2Q9Y261 457 aaPredicted RBP12.25□□□□□ -0.45
SYMPK-213ENST00000599460 MYO7BQ6PIF6 2116 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 TRAV14DV4A0A0A6YYC5 116 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 RPL7P18124 248 aaKnown RBP12.25□□□□□ -0.45
SYMPK-213ENST00000599460 RPUSD1Q9UJJ7 312 aaKnown RBP12.25□□□□□ -0.45
SYMPK-213ENST00000599460 GOLT1BQ9Y3E0 138 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 CSN3P07498 182 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 Q6P435 159 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 LINC00518Q8N0U6 118 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 COL4A4P53420 1690 aaPredicted RBP12.25□□□□□ -0.45
SYMPK-213ENST00000599460 FAM74A7A6NL05 159 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 CEACAM8P31997 349 aaPredicted RBP12.25□□□□□ -0.45
SYMPK-213ENST00000599460 GAFA1Q96PS6 74 aa12.25□□□□□ -0.45
SYMPK-213ENST00000599460 WDR25Q64LD2 544 aaPredicted RBP12.24□□□□□ -0.45
SYMPK-213ENST00000599460 WNT10AQ9GZT5 417 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 SRCAPQ6ZRS2 3230 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 C15orf61A6NNL5 157 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 M0QZK8 103 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 TIMM23O14925 209 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 GGCTO75223 188 aaKnown RBP12.24□□□□□ -0.45
SYMPK-213ENST00000599460 NAPSAO96009 420 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 DSCR9P59020 149 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 PKIAP61925 76 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
SYMPK-213ENST00000599460 LAMTOR1Q6IAA8 161 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 GATAD1Q8WUU5 269 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 HEATR5AQ86XA9 2040 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 COL4A3Q01955 1670 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 IGHV3OR16-13A0A075B7E8 117 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 IGHV2-26A0A0B4J1V2 119 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 IGHV3-74A0A0B4J1X5 117 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 COL8A2P25067 703 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 NTF4P34130 210 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 IER3P46695 156 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 TMEM183BQ1AE95 376 aa12.24□□□□□ -0.45
SYMPK-213ENST00000599460 TOMM20LQ6UXN7 152 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms