RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 MARC2Q969Z3 335 aa7.37□□□□□ -1.23
VRK3-216ENST00000599342 MOB3AQ96BX8 217 aa7.37□□□□□ -1.23
VRK3-216ENST00000599342 GAR1Q9NY12 217 aaKnown RBP7.37□□□□□ -1.23
VRK3-216ENST00000599342 MLXQ9UH92 298 aa7.37□□□□□ -1.23
VRK3-216ENST00000599342 UFC1Q9Y3C8 167 aa7.37□□□□□ -1.23
VRK3-216ENST00000599342 SELENOKQ9Y6D0 94 aa7.37□□□□□ -1.23
VRK3-216ENST00000599342 IGHV3-35A0A0C4DH35 117 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 TGOLN2O43493 480 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 PGLYRP1O75594 196 aaPredicted RBP7.36□□□□□ -1.23
VRK3-216ENST00000599342 SNAPC5O75971 98 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 OR13C7P0DN81 318 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 F2RP25116 425 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 PTBP1P26599 531 aaKnown RBP eCLIP7.36□□□□□ -1.23
VRK3-216ENST00000599342 S100GP29377 79 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 PRSS3P35030 304 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 RPS19P39019 145 aaKnown RBP7.36□□□□□ -1.23
VRK3-216ENST00000599342 RFX2P48378 723 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 ELLP55199 621 aaPredicted RBP7.36□□□□□ -1.23
VRK3-216ENST00000599342 LSM3P62310 102 aaKnown RBP7.36□□□□□ -1.23
VRK3-216ENST00000599342 ZNF585BQ52M93 769 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 TM4SF20Q53R12 229 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 SLC25A24Q6NUK1 477 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 DHRS11Q6UWP2 260 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 UNQ9165/PRO28630Q6UXU0 137 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 OR10W1Q8NGF6 305 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 OR1L6Q8NGR2 347 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 OR1L8Q8NGR8 309 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 OR6F1Q8NGZ6 308 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 VN1R17PQ8TDU5 208 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 LSM10Q969L4 123 aaKnown RBP7.36□□□□□ -1.23
VRK3-216ENST00000599342 DGCR14Q96DF8 476 aaKnown RBP7.36□□□□□ -1.23
VRK3-216ENST00000599342 HINT2Q9BX68 163 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 MRPL27Q9P0M9 148 aaKnown RBP7.36□□□□□ -1.23
VRK3-216ENST00000599342 ANAPC10Q9UM13 185 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 DNAH7Q8WXX0 4024 aa7.36□□□□□ -1.23
VRK3-216ENST00000599342 STAB2Q8WWQ8 2551 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 A0A087WXM4 84 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 LOC102724200A0A096LPH7 203 aaPredicted RBP7.35□□□□□ -1.23
VRK3-216ENST00000599342 TRAV25A0A0B4J276 109 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 TEX50A0A1B0GTY4 177 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 OR2T8A6NH00 312 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 GPR31O00270 319 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 JTBO76095 146 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 TNFAIP8O95379 198 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 KRASP01116 189 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 SERPINE2P07093 398 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 HRH1P35367 487 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 G6PCP35575 357 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 LPAR6P43657 344 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 TSPAN5P62079 268 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 SLC38A6Q8IZM9 456 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 UBAC2Q8NBM4 344 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 FCAMRQ8WWV6 532 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 BSCL2Q96G97 398 aaPredicted RBP7.35□□□□□ -1.23
VRK3-216ENST00000599342 TMEM56Q96MV1 263 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 TSC22D3Q99576 134 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 GGTLC1Q9BX51 225 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 FXYD6Q9H0Q3 95 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 DAZ1Q9NQZ3 744 aaKnown RBP7.35□□□□□ -1.23
VRK3-216ENST00000599342 PRNDQ9UKY0 176 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 OR51B2Q9Y5P1 312 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 SACSQ9NZJ4 4579 aa7.35□□□□□ -1.23
VRK3-216ENST00000599342 DYNC2H1Q8NCM8 4307 aaKnown RBP7.34□□□□□ -1.23
VRK3-216ENST00000599342 SMIM31A0A1B0GVY4 71 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 C8orf88P0DMB2 117 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 NAT1P18440 290 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 HLA-DMAP28067 261 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 WT1-ASQ06250 92 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 PHLDA2Q53GA4 152 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 LAMTOR1Q6IAA8 161 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 LPCAT3Q6P1A2 487 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 SPSB3Q6PJ21 355 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 OR5B3Q8NH48 314 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 TMEM190Q8WZ59 177 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 SLC25A46Q96AG3 418 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 YIPF6Q96EC8 236 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 SPAG8Q99932 426 aaPredicted RBP7.34□□□□□ -1.23
VRK3-216ENST00000599342 ZNF436Q9C0F3 470 aaPredicted RBP7.34□□□□□ -1.23
VRK3-216ENST00000599342 NDUFA4L2Q9NRX3 87 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 FKBP11Q9NYL4 201 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 C21orf62Q9NYP8 219 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 COMMD3Q9UBI1 195 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 NSG2Q9Y328 171 aa7.34□□□□□ -1.23
VRK3-216ENST00000599342 F11RQ9Y624 299 aaKnown RBP7.34□□□□□ -1.23
VRK3-216ENST00000599342 IGHV3-21A0A0B4J1V1 117 aa7.33□□□□□ -1.24
VRK3-216ENST00000599342 NDUFA4O00483 81 aa7.33□□□□□ -1.24
VRK3-216ENST00000599342 EIF4EP06730 217 aaKnown RBP7.33□□□□□ -1.24
VRK3-216ENST00000599342 Q56UQ5 140 aa7.33□□□□□ -1.24
VRK3-216ENST00000599342 CADM3Q8N126 398 aa7.33□□□□□ -1.24
VRK3-216ENST00000599342 OR2C3Q8N628 320 aa7.33□□□□□ -1.24
VRK3-216ENST00000599342 ATP6V0BQ99437 205 aa7.33□□□□□ -1.24
VRK3-216ENST00000599342 C20orf24Q9BUV8 137 aa7.33□□□□□ -1.24
VRK3-216ENST00000599342 C5orf66Q9H5L9 145 aa7.33□□□□□ -1.24
VRK3-216ENST00000599342 C15orf61A6NNL5 157 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 TSPAN4O14817 238 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 APOA1P02647 267 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 RCVRNP35243 200 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 APOC4P55056 127 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 H2BFWTQ7Z2G1 175 aa7.32□□□□□ -1.24
VRK3-216ENST00000599342 TBC1D26Q86UD7 250 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms