RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 C2orf70A6NJV1 201 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 A8MZ25 164 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 F8W735 103 aaPredicted RBP9.18□□□□□ -0.94
LIG1-217ENST00000599165 LGALS9O00182 355 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 GGCTO75223 188 aaKnown RBP9.18□□□□□ -0.94
LIG1-217ENST00000599165 P0C879 139 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 IGHV4-30-4P0DP06 118 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 HIST1H1BP16401 226 aaKnown RBP9.18□□□□□ -0.94
LIG1-217ENST00000599165 RND3P61587 244 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 CD300EQ496F6 205 aaPredicted RBP9.18□□□□□ -0.94
LIG1-217ENST00000599165 UNQ9165/PRO28630Q6UXU0 137 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 GPHB5Q86YW7 130 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 SLC38A6Q8IZM9 456 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 GDPD1Q8N9F7 314 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 CACNG8Q8WXS5 425 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 WWC2-AS2Q96NR7 200 aa9.18□□□□□ -0.94
LIG1-217ENST00000599165 FAM212BQ9NTI7 297 aaPredicted RBP9.18□□□□□ -0.94
LIG1-217ENST00000599165 DYNC2H1Q8NCM8 4307 aaKnown RBP9.17□□□□□ -0.94
LIG1-217ENST00000599165 C15orf61A6NNL5 157 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 ZNF785A8K8V0 405 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 SERPINE2P07093 398 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 TRAPPC2P0DI81 140 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 TRAPPC2BP0DI82 140 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 OR13C7P0DN81 318 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 ARL3P36405 182 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 TMBIM6P55061 237 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 ERVK-16P61578 105 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 IZUMO4Q1ZYL8 232 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 DEFB114Q30KQ6 69 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 RNASE10Q5GAN6 216 aaKnown RBP9.17□□□□□ -0.94
LIG1-217ENST00000599165 THOC7Q6I9Y2 204 aaKnown RBP9.17□□□□□ -0.94
LIG1-217ENST00000599165 FAAP20Q6NZ36 180 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 ARRDC1Q8N5I2 433 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 TMEM229BQ8NBD8 167 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 OR1L8Q8NGR8 309 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 RAB2BQ8WUD1 216 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 EEF1AKMT3Q96AZ1 226 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 TP53RKQ96S44 253 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 SLIRPQ9GZT3 109 aaKnown RBP9.17□□□□□ -0.94
LIG1-217ENST00000599165 ZC4H2Q9NQZ6 224 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 CCDC59Q9P031 241 aaKnown RBP9.17□□□□□ -0.94
LIG1-217ENST00000599165 OR51B2Q9Y5P1 312 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 SELENOKQ9Y6D0 94 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 NBEAL2Q6ZNJ1 2754 aa9.17□□□□□ -0.94
LIG1-217ENST00000599165 A8MWP6 167 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 H3BMQ9 156 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 GABARAPH6UMI1 98 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 K7EIM0 57 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 DHFRP00374 187 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 IGKV1-5P01602 117 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 CLEC3BP05452 202 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 DEFA4P12838 97 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 FOLR2P14207 255 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 TBPP20226 339 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 GPR183P32249 361 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 TATDN3Q17R31 274 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 FAM209BQ5JX69 171 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 LPCAT3Q6P1A2 487 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 Q8N402 240 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 SMIM4Q8WVI0 70 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 LSM10Q969L4 123 aaKnown RBP9.16□□□□□ -0.94
LIG1-217ENST00000599165 SOSTQ9BQB4 213 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 BCL7BQ9BQE9 202 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 PEMTQ9UBM1 199 aa9.16□□□□□ -0.94
LIG1-217ENST00000599165 F11RQ9Y624 299 aaKnown RBP9.16□□□□□ -0.94
LIG1-217ENST00000599165 TRBV7-1A0A0A6YYK4 115 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 A0A0G2JRQ6 117 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 H0Y980 276 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 RGS5O15539 181 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 CBLN1P23435 193 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 ADMP35318 185 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 RPL5P46777 297 aaKnown RBP9.15□□□□□ -0.94
LIG1-217ENST00000599165 PPP5CP53041 499 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 PIGPP57054 158 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 LCN12Q6JVE5 192 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 STEAP1BQ6NZ63 245 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 OR13C8Q8NGS7 320 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 OR2K2Q8NGT1 345 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 OR5B3Q8NH48 314 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 VN1R17PQ8TDU5 208 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 ISOC1Q96CN7 298 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 CXorf58Q96LI9 332 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 TM2D3Q9BRN9 247 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 NXF2Q9GZY0 626 aaKnown RBP9.15□□□□□ -0.94
LIG1-217ENST00000599165 MLXQ9UH92 298 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 PRNDQ9UKY0 176 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 CEPT1Q9Y6K0 416 aa9.15□□□□□ -0.94
LIG1-217ENST00000599165 IGHV3-21A0A0B4J1V1 117 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 A0A0B4J293 547 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 IGHV3-35A0A0C4DH35 117 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 CTDSPLO15194 276 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 RAB3DO95716 219 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 CD7P09564 240 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 C8orf88P0DMB2 117 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 TAS2R19P59542 299 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 TM4SF20Q53R12 229 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 LINC00322Q6ZN03 302 aaPredicted RBP9.14□□□□□ -0.95
LIG1-217ENST00000599165 HSD17B13Q7Z5P4 300 aaPredicted RBP9.14□□□□□ -0.95
LIG1-217ENST00000599165 OR2C3Q8N628 320 aa9.14□□□□□ -0.95
LIG1-217ENST00000599165 TERB2Q8NHR7 220 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms