RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 CPNE2Q96FN4 548 aaPredicted RBP2.87□□□□□ -1.95
HERC3-213ENST00000598772 UQCC2Q9BRT2 126 aa2.87□□□□□ -1.95
HERC3-213ENST00000598772 AGMATQ9BSE5 352 aa2.87□□□□□ -1.95
HERC3-213ENST00000598772 PAXXQ9BUH6 204 aa2.87□□□□□ -1.95
HERC3-213ENST00000598772 OR51E2Q9H255 320 aa2.87□□□□□ -1.95
HERC3-213ENST00000598772 BANF2Q9H503 90 aa2.87□□□□□ -1.95
HERC3-213ENST00000598772 NOP10Q9NPE3 64 aaKnown RBP2.87□□□□□ -1.95
HERC3-213ENST00000598772 GID8Q9NWU2 228 aa2.87□□□□□ -1.95
HERC3-213ENST00000598772 H2AFY2Q9P0M6 372 aaPredicted RBP2.87□□□□□ -1.95
HERC3-213ENST00000598772 RCL1Q9Y2P8 373 aaKnown RBP2.87□□□□□ -1.95
HERC3-213ENST00000598772 TRAV5A0A0B4J249 113 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 A0A0D9SG52 128 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 GAGE12BA1L429 117 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 RGS16O15492 202 aaPredicted RBP2.86□□□□□ -1.95
HERC3-213ENST00000598772 DENRO43583 198 aaKnown RBP2.86□□□□□ -1.95
HERC3-213ENST00000598772 FCGR3BO75015 233 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 GAGE7O76087 117 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 HMGN1P05114 100 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 CTSGP08311 255 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 ZNF735P0CB33 412 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 GAGE12FP0CL80 117 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 GAGE12GP0CL81 117 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 GAGE12IP0CL82 117 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 RAB3AP20336 220 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 SLC2A5P22732 501 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 NPPCP23582 126 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 YIF1BQ5BJH7 314 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 FFAR4Q5NUL3 377 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 GDF5OSQ5U4N7 250 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 TMEM236Q5W0B7 351 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 TOMM20LQ6UXN7 152 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 CD300LDQ6UXZ3 194 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 FAM220AQ7Z4H9 259 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 LRTM2Q8N967 370 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 OR10J6PQ8NGY7 276 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 TMEM167AQ8TBQ9 72 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 SELENOIQ9C0D9 397 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 OR2D2Q9H210 308 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 RIMS4Q9H426 269 aaPredicted RBP2.86□□□□□ -1.95
HERC3-213ENST00000598772 VSIRQ9H7M9 311 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 PAK1IP1Q9NWT1 392 aaPredicted RBP2.86□□□□□ -1.95
HERC3-213ENST00000598772 CMTM6Q9NX76 183 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 LGALS13Q9UHV8 139 aa2.86□□□□□ -1.95
HERC3-213ENST00000598772 CCDC182A6NF36 153 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 MARCH11A6NNE9 402 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 FXYD1O00168 92 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 CA11O75493 328 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 NAPSAO96009 420 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 FABP3P05413 133 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 OR13C7P0DN81 318 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 HLA-DRB4P13762 266 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 TNFSF8P32971 234 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 ATP6V1E1P36543 226 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 P2RY1P47900 373 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 HOXA1P49639 335 aaPredicted RBP2.85□□□□□ -1.95
HERC3-213ENST00000598772 PSG9Q00887 426 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 ZNF415Q09FC8 603 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 ASAH1Q13510 395 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 GPR176Q14439 515 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 IRF3Q14653 427 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 HMGN3Q15651 99 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 NHLRC3Q5JS37 347 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 GLYATQ6IB77 296 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 WFDC10BQ8IUB3 73 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 MNS1Q8NEH6 495 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 OR10W1Q8NGF6 305 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 OR51A2Q8NGJ7 313 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 OR2G2Q8NGZ5 317 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 OSR1Q8TAX0 266 aaPredicted RBP2.85□□□□□ -1.95
HERC3-213ENST00000598772 DYDC1Q8WWB3 177 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 SLC25A46Q96AG3 418 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 PYURFQ96I23 114 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 NARS2Q96I59 477 aaKnown RBP2.85□□□□□ -1.95
HERC3-213ENST00000598772 OR10C1Q96KK4 312 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 LINC01587Q99440 93 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 FAAP24Q9BTP7 215 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 TEX12Q9BXU0 123 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 HRASLSQ9HDD0 168 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 CLN6Q9NWW5 311 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 SDHAF2Q9NX18 166 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 RDH8Q9NYR8 311 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 SAMHD1Q9Y3Z3 626 aaKnown RBP2.85□□□□□ -1.95
HERC3-213ENST00000598772 TIMM8BQ9Y5J9 83 aaPredicted RBP2.85□□□□□ -1.95
HERC3-213ENST00000598772 V9GYY5 206 aaPredicted RBP2.85□□□□□ -1.95
HERC3-213ENST00000598772 HLA-DRB4X5D2U9 266 aa2.85□□□□□ -1.95
HERC3-213ENST00000598772 A0A1W2PQL4 384 aaPredicted RBP2.84□□□□□ -1.95
HERC3-213ENST00000598772 GNG7O60262 68 aa2.84□□□□□ -1.95
HERC3-213ENST00000598772 PITX3O75364 302 aa2.84□□□□□ -1.95
HERC3-213ENST00000598772 CRTAPO75718 401 aaPredicted RBP2.84□□□□□ -1.95
HERC3-213ENST00000598772 RPSAP08865 295 aaKnown RBP2.84□□□□□ -1.95
HERC3-213ENST00000598772 HTR1AP08908 422 aa2.84□□□□□ -1.95
HERC3-213ENST00000598772 ZNF93P35789 620 aaPredicted RBP2.84□□□□□ -1.95
HERC3-213ENST00000598772 EIF2B2P49770 351 aaKnown RBP2.84□□□□□ -1.95
HERC3-213ENST00000598772 MFAP4P55083 255 aa2.84□□□□□ -1.95
HERC3-213ENST00000598772 MRPS15P82914 257 aaKnown RBP2.84□□□□□ -1.95
HERC3-213ENST00000598772 UNC119Q13432 240 aa2.84□□□□□ -1.95
HERC3-213ENST00000598772 OR2G6Q5TZ20 316 aa2.84□□□□□ -1.95
HERC3-213ENST00000598772 REG3GQ6UW15 175 aa2.84□□□□□ -1.95
HERC3-213ENST00000598772 LYPD5Q6UWN5 251 aa2.84□□□□□ -1.95
HERC3-213ENST00000598772 DCANP1Q8TF63 244 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms