RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 NAT1P18440 290 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 PSMB6P28072 239 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 MAS1LP35410 378 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 INPP1P49441 399 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 RPL8P62917 257 aaKnown RBP8.05□□□□□ -1.12
VRK3-214ENST00000598553 BAK1Q16611 211 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 POU2AF1Q16633 256 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 CD300EQ496F6 205 aaPredicted RBP8.05□□□□□ -1.12
VRK3-214ENST00000598553 ZNF585BQ52M93 769 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 TMEM69Q5SWH9 247 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 AADACL3Q5VUY0 350 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 NRARPQ7Z6K4 114 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 NECAP1Q8NC96 275 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 ZBTB34Q8NCN2 500 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 ENKURQ8TC29 256 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 GIMAP1Q8WWP7 306 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 MOB3AQ96BX8 217 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 TM2D3Q9BRN9 247 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 ZNF2Q9BSG1 426 aaPredicted RBP8.05□□□□□ -1.12
VRK3-214ENST00000598553 PLEKHA3Q9HB20 300 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 IFT46Q9NQC8 304 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 TMEM140Q9NV12 185 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 BET1LQ9NYM9 111 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 SIGLEC8Q9NYZ4 499 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 COMMD3Q9UBI1 195 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 NSG2Q9Y328 171 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 IGHV3-35A0A0C4DH35 117 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 TMEM213A2RRL7 107 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 C2orf70A6NJV1 201 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 ZNF785A8K8V0 405 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 FAM25AB3EWG3 89 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 FAM25CB3EWG5 89 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 FAM25GB3EWG6 89 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 H0Y980 276 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 RBFOX2O43251 390 aaKnown RBP eCLIP8.04□□□□□ -1.12
VRK3-214ENST00000598553 HPGDSO60760 199 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 ELK1P19419 428 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 HLA-DMAP28067 261 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 HRH1P35367 487 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 CATR1Q13166 79 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 IL18Q14116 193 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 TATDN3Q17R31 274 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 KLK9Q2XQG4 91 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 FAM209BQ5JX69 171 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 UNQ9165/PRO28630Q6UXU0 137 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 Q8N402 240 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 GPX8Q8TED1 209 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 FCAMRQ8WWV6 532 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 WDR89Q96FK6 387 aaPredicted RBP8.04□□□□□ -1.12
VRK3-214ENST00000598553 S100A16Q96FQ6 103 aaKnown RBP8.04□□□□□ -1.12
VRK3-214ENST00000598553 CMTM3Q96MX0 182 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 HRASLSQ9HDD0 168 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 KLK9Q9UKQ9 250 aa8.04□□□□□ -1.12
VRK3-214ENST00000598553 IGHV3-21A0A0B4J1V1 117 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 A8MZ25 164 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 PGLYRP1O75594 196 aaPredicted RBP8.03□□□□□ -1.12
VRK3-214ENST00000598553 G6PCP35575 357 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 TAS2R31P59538 309 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 HERV-K104P61576 105 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 WT1-ASQ06250 92 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 HAGHQ16775 308 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 PHLDA2Q53GA4 152 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 LCN12Q6JVE5 192 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 PLET1Q6UQ28 207 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 DHRS11Q6UWP2 260 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 SGPP2Q8IWX5 399 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 OR4A5Q8NH83 315 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 FAM110AQ9BQ89 295 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 AIFM2Q9BRQ8 373 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 EDA2RQ9HAV5 297 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 PEMTQ9UBM1 199 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 MLXQ9UH92 298 aa8.03□□□□□ -1.12
VRK3-214ENST00000598553 DYNC2H1Q8NCM8 4307 aaKnown RBP8.02□□□□□ -1.13
VRK3-214ENST00000598553 TEX50A0A1B0GTY4 177 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 RBMY1BA6NDE4 496 aaKnown RBP8.02□□□□□ -1.13
VRK3-214ENST00000598553 RBMY1EA6NEQ0 496 aaKnown RBP8.02□□□□□ -1.13
VRK3-214ENST00000598553 F8W735 103 aaPredicted RBP8.02□□□□□ -1.13
VRK3-214ENST00000598553 M0QYG6 137 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 HPRT1P00492 218 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 IGKV1-39P01597 117 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 IGKV1D-39P04432 117 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 RBMY1DP0C7P1 496 aaKnown RBP8.02□□□□□ -1.13
VRK3-214ENST00000598553 FOLR2P14207 255 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 NQO2P16083 231 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 GPR183P32249 361 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 ARL3P36405 182 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 LPAR6P43657 344 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 NDUFA5Q16718 116 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 IZUMO4Q1ZYL8 232 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 DEFB114Q30KQ6 69 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 CASC10Q5T4H9 136 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 ZFAND6Q6FIF0 208 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 LINC00322Q6ZN03 302 aaPredicted RBP8.02□□□□□ -1.13
VRK3-214ENST00000598553 DEFB125Q8N687 156 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 DUSP18Q8NEJ0 188 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 OR2K2Q8NGT1 345 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 OR5H2Q8NGV7 314 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 MUC7Q8TAX7 377 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 ZMAT4Q9H898 229 aa8.02□□□□□ -1.13
VRK3-214ENST00000598553 EXTL2Q9UBQ6 330 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms