RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 ZMAT5Q9UDW3 170 aaKnown RBP12.37□□□□□ -0.43
TRIM28-213ENST00000598355 DMRT1Q9Y5R6 373 aa12.37□□□□□ -0.43
TRIM28-213ENST00000598355 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.36□□□□□ -0.43
TRIM28-213ENST00000598355 TEX50A0A1B0GTY4 177 aa12.36□□□□□ -0.43
TRIM28-213ENST00000598355 OR2J3O76001 311 aa12.36□□□□□ -0.43
TRIM28-213ENST00000598355 UCP1P25874 307 aa12.36□□□□□ -0.43
TRIM28-213ENST00000598355 ETV6P41212 452 aa12.36□□□□□ -0.43
TRIM28-213ENST00000598355 C15orf32Q32M92 178 aa12.36□□□□□ -0.43
TRIM28-213ENST00000598355 SCGB2B2Q4G0G5 96 aa12.36□□□□□ -0.43
TRIM28-213ENST00000598355 ZNF429Q86V71 674 aa12.36□□□□□ -0.43
TRIM28-213ENST00000598355 OR1L8Q8NGR8 309 aa12.36□□□□□ -0.43
TRIM28-213ENST00000598355 OR5B3Q8NH48 314 aa12.36□□□□□ -0.43
TRIM28-213ENST00000598355 PRNDQ9UKY0 176 aa12.36□□□□□ -0.43
TRIM28-213ENST00000598355 ANKRD34BA5PLL1 514 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 DPPA5A6NC42 116 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 DBX1A6NMT0 343 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 DISC1C4P0D8 188 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 BMPR1BO00238 502 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 B3GALNT1O75752 331 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 DHFRP00374 187 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 HIST1H1BP16401 226 aaKnown RBP12.35□□□□□ -0.43
TRIM28-213ENST00000598355 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 WT1-ASQ06250 92 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 GDPD1Q8N9F7 314 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 CCDC71LQ8N9Z2 235 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 OR10W1Q8NGF6 305 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 CCDC140Q96MF4 163 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 PRRT1Q99946 306 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 RTBDNQ9BSG5 229 aaPredicted RBP12.35□□□□□ -0.43
TRIM28-213ENST00000598355 C5orf66Q9H5L9 145 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 GPR132Q9UNW8 380 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 NSG2Q9Y328 171 aa12.35□□□□□ -0.43
TRIM28-213ENST00000598355 C3orf85A0A1B0GTC6 90 aa12.34□□□□□ -0.43
TRIM28-213ENST00000598355 SNAPC5O75971 98 aa12.34□□□□□ -0.43
TRIM28-213ENST00000598355 IGKV1-5P01602 117 aa12.34□□□□□ -0.43
TRIM28-213ENST00000598355 REG1AP05451 166 aa12.34□□□□□ -0.43
TRIM28-213ENST00000598355 TRAPPC2P0DI81 140 aa12.34□□□□□ -0.43
TRIM28-213ENST00000598355 TRAPPC2BP0DI82 140 aa12.34□□□□□ -0.43
TRIM28-213ENST00000598355 KLF9Q13886 244 aaPredicted RBP12.34□□□□□ -0.43
TRIM28-213ENST00000598355 OR51S1Q8NGJ8 323 aa12.34□□□□□ -0.43
TRIM28-213ENST00000598355 LSM10Q969L4 123 aaKnown RBP12.34□□□□□ -0.43
TRIM28-213ENST00000598355 FKBP11Q9NYL4 201 aa12.34□□□□□ -0.43
TRIM28-213ENST00000598355 COPZ2Q9P299 210 aa12.34□□□□□ -0.43
TRIM28-213ENST00000598355 FBXL7Q9UJT9 491 aa12.34□□□□□ -0.43
TRIM28-213ENST00000598355 NDUFB8O95169 186 aa12.33□□□□□ -0.44
TRIM28-213ENST00000598355 SERPINE2P07093 398 aa12.33□□□□□ -0.44
TRIM28-213ENST00000598355 S100A5P33763 92 aa12.33□□□□□ -0.44
TRIM28-213ENST00000598355 IL34Q6ZMJ4 242 aa12.33□□□□□ -0.44
TRIM28-213ENST00000598355 H2BFWTQ7Z2G1 175 aa12.33□□□□□ -0.44
TRIM28-213ENST00000598355 DEDD2Q8WXF8 326 aa12.33□□□□□ -0.44
TRIM28-213ENST00000598355 THAP7Q9BT49 309 aaPredicted RBP12.33□□□□□ -0.44
TRIM28-213ENST00000598355 SIGLEC8Q9NYZ4 499 aa12.33□□□□□ -0.44
TRIM28-213ENST00000598355 OR51B2Q9Y5P1 312 aa12.33□□□□□ -0.44
TRIM28-213ENST00000598355 COL7A1Q02388 2944 aa12.33□□□□□ -0.44
TRIM28-213ENST00000598355 CRYM-AS1A6NIL9 109 aa12.32□□□□□ -0.44
TRIM28-213ENST00000598355 SAP30O75446 220 aa12.32□□□□□ -0.44
TRIM28-213ENST00000598355 Q8N402 240 aa12.32□□□□□ -0.44
TRIM28-213ENST00000598355 OR9G4Q8NGQ1 327 aa12.32□□□□□ -0.44
TRIM28-213ENST00000598355 GLYATL2Q8WU03 294 aa12.32□□□□□ -0.44
TRIM28-213ENST00000598355 TMEM222Q9H0R3 208 aa12.32□□□□□ -0.44
TRIM28-213ENST00000598355 NAA60Q9H7X0 242 aa12.32□□□□□ -0.44
TRIM28-213ENST00000598355 NDUFA13Q9P0J0 144 aa12.32□□□□□ -0.44
TRIM28-213ENST00000598355 C14orf166Q9Y224 244 aaKnown RBP12.32□□□□□ -0.44
TRIM28-213ENST00000598355 ZNF256Q9Y2P7 627 aaPredicted RBP12.32□□□□□ -0.44
TRIM28-213ENST00000598355 F11RQ9Y624 299 aaKnown RBP12.32□□□□□ -0.44
TRIM28-213ENST00000598355 MFSD2BA6NFX1 497 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 CDS2O95674 445 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 IGLV1-51P01701 117 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 OR13C7P0DN81 318 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 MFAP2P55001 183 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 SYNJ2BPP57105 145 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 PRCDQ00LT1 54 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 RPEL1Q2QD12 228 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 AARDQ4LEZ3 155 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 ZNF114Q8NC26 417 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 OR6Q1Q8NGQ2 317 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 TMEM230Q96A57 120 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 GALNT14Q96FL9 552 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 CXorf58Q96LI9 332 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 SRRQ9GZT4 340 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 SCP2D1Q9UJQ7 156 aa12.31□□□□□ -0.44
TRIM28-213ENST00000598355 LSM4Q9Y4Z0 139 aaKnown RBP12.31□□□□□ -0.44
TRIM28-213ENST00000598355 TRBV7-1A0A0A6YYK4 115 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 A0A0G2JRQ6 117 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 INS-IGF2F8WCM5 200 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 OR5AC1P0C628 307 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 DEFA4P12838 97 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 AP3S2P59780 193 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 DCTN2Q13561 401 aaKnown RBP12.3□□□□□ -0.44
TRIM28-213ENST00000598355 SP6Q3SY56 376 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 PYDC2Q56P42 97 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 LHFPL5Q8TAF8 219 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 ZNF502Q8TBZ5 544 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 EEF1AKMT3Q96AZ1 226 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 TMEM56Q96MV1 263 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 ATP6V0BQ99437 205 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 ELOVL1Q9BW60 279 aa12.3□□□□□ -0.44
TRIM28-213ENST00000598355 A0A0B4J293 547 aa12.29□□□□□ -0.44
TRIM28-213ENST00000598355 ATG12O94817 140 aa12.29□□□□□ -0.44
TRIM28-213ENST00000598355 CSN3P07498 182 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms