RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SNAPC5O75971 98 aa16.15■□□□□ 0.18
PNKP-209ENST00000596726 DHFRP00374 187 aa16.15■□□□□ 0.18
PNKP-209ENST00000596726 CTSDP07339 412 aaPredicted RBP16.15■□□□□ 0.18
PNKP-209ENST00000596726 TRAPPC2P0DI81 140 aa16.15■□□□□ 0.18
PNKP-209ENST00000596726 TRAPPC2BP0DI82 140 aa16.15■□□□□ 0.18
PNKP-209ENST00000596726 HIST1H1BP16401 226 aaKnown RBP16.15■□□□□ 0.18
PNKP-209ENST00000596726 ECI1P42126 302 aa16.15■□□□□ 0.18
PNKP-209ENST00000596726 OR10W1Q8NGF6 305 aa16.15■□□□□ 0.18
PNKP-209ENST00000596726 TP53RKQ96S44 253 aa16.15■□□□□ 0.18
PNKP-209ENST00000596726 TSC22D3Q99576 134 aa16.15■□□□□ 0.18
PNKP-209ENST00000596726 PRNDQ9UKY0 176 aa16.15■□□□□ 0.18
PNKP-209ENST00000596726 NDUFB8O95169 186 aa16.14■□□□□ 0.17
PNKP-209ENST00000596726 SERPINE2P07093 398 aa16.14■□□□□ 0.17
PNKP-209ENST00000596726 HSD17B13Q7Z5P4 300 aaPredicted RBP16.14■□□□□ 0.17
PNKP-209ENST00000596726 CCDC71LQ8N9Z2 235 aa16.14■□□□□ 0.17
PNKP-209ENST00000596726 RTBDNQ9BSG5 229 aaPredicted RBP16.14■□□□□ 0.17
PNKP-209ENST00000596726 TMEM14BQ9NUH8 114 aa16.14■□□□□ 0.17
PNKP-209ENST00000596726 SLC2A8Q9NY64 477 aa16.14■□□□□ 0.17
PNKP-209ENST00000596726 FKBP11Q9NYL4 201 aa16.14■□□□□ 0.17
PNKP-209ENST00000596726 COPZ2Q9P299 210 aa16.14■□□□□ 0.17
PNKP-209ENST00000596726 OR51B2Q9Y5P1 312 aa16.14■□□□□ 0.17
PNKP-209ENST00000596726 DMRT1Q9Y5R6 373 aa16.14■□□□□ 0.17
PNKP-209ENST00000596726 V9GYH0 126 aa16.14■□□□□ 0.17
PNKP-209ENST00000596726 C3orf85A0A1B0GTC6 90 aa16.13■□□□□ 0.17
PNKP-209ENST00000596726 DBX1A6NMT0 343 aa16.13■□□□□ 0.17
PNKP-209ENST00000596726 C15orf61A6NNL5 157 aa16.13■□□□□ 0.17
PNKP-209ENST00000596726 BMPR1BO00238 502 aa16.13■□□□□ 0.17
PNKP-209ENST00000596726 SAP30O75446 220 aa16.13■□□□□ 0.17
PNKP-209ENST00000596726 WT1-ASQ06250 92 aa16.13■□□□□ 0.17
PNKP-209ENST00000596726 SURF2Q15527 256 aaPredicted RBP16.13■□□□□ 0.17
PNKP-209ENST00000596726 FAM209BQ5JX69 171 aa16.13■□□□□ 0.17
PNKP-209ENST00000596726 PRRT1Q99946 306 aa16.13■□□□□ 0.17
PNKP-209ENST00000596726 THAP7Q9BT49 309 aaPredicted RBP16.13■□□□□ 0.17
PNKP-209ENST00000596726 GPR132Q9UNW8 380 aa16.13■□□□□ 0.17
PNKP-209ENST00000596726 DEFA4P12838 97 aa16.12■□□□□ 0.17
PNKP-209ENST00000596726 S100A5P33763 92 aa16.12■□□□□ 0.17
PNKP-209ENST00000596726 ZNF79Q15937 498 aa16.12■□□□□ 0.17
PNKP-209ENST00000596726 RPEL1Q2QD12 228 aa16.12■□□□□ 0.17
PNKP-209ENST00000596726 H2BFWTQ7Z2G1 175 aa16.12■□□□□ 0.17
PNKP-209ENST00000596726 CCDC190Q86UF4 302 aa16.12■□□□□ 0.17
PNKP-209ENST00000596726 OR51S1Q8NGJ8 323 aa16.12■□□□□ 0.17
PNKP-209ENST00000596726 OR5B3Q8NH48 314 aa16.12■□□□□ 0.17
PNKP-209ENST00000596726 ELOVL1Q9BW60 279 aa16.12■□□□□ 0.17
PNKP-209ENST00000596726 B3GALNT1O75752 331 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 IGKV1-5P01602 117 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 P0C879 139 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 OR13C7P0DN81 318 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 UCP1P25874 307 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 SYNJ2BPP57105 145 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 IL34Q6ZMJ4 242 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 GDPD1Q8N9F7 314 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 OR9G4Q8NGQ1 327 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 LSM10Q969L4 123 aaKnown RBP16.11■□□□□ 0.17
PNKP-209ENST00000596726 TRIM63Q969Q1 353 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 CCDC140Q96MF4 163 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 OR4C12Q96R67 309 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 PRR25Q96S07 402 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 C5orf66Q9H5L9 145 aa16.11■□□□□ 0.17
PNKP-209ENST00000596726 C14orf166Q9Y224 244 aaKnown RBP16.11■□□□□ 0.17
PNKP-209ENST00000596726 ZNF256Q9Y2P7 627 aaPredicted RBP16.11■□□□□ 0.17
PNKP-209ENST00000596726 SP6Q3SY56 376 aa16.1■□□□□ 0.17
PNKP-209ENST00000596726 DEFB121Q5J5C9 76 aa16.1■□□□□ 0.17
PNKP-209ENST00000596726 OR4A16Q8NH70 328 aa16.1■□□□□ 0.17
PNKP-209ENST00000596726 HINT2Q9BX68 163 aa16.1■□□□□ 0.17
PNKP-209ENST00000596726 ETV6P41212 452 aa16.09■□□□□ 0.17
PNKP-209ENST00000596726 KLF9Q13886 244 aaPredicted RBP16.09■□□□□ 0.17
PNKP-209ENST00000596726 TATDN3Q17R31 274 aa16.09■□□□□ 0.17
PNKP-209ENST00000596726 PYDC2Q56P42 97 aa16.09■□□□□ 0.17
PNKP-209ENST00000596726 Q8N402 240 aa16.09■□□□□ 0.17
PNKP-209ENST00000596726 OR6Q1Q8NGQ2 317 aa16.09■□□□□ 0.17
PNKP-209ENST00000596726 EEF1AKMT3Q96AZ1 226 aa16.09■□□□□ 0.17
PNKP-209ENST00000596726 CXorf58Q96LI9 332 aa16.09■□□□□ 0.17
PNKP-209ENST00000596726 TMEM56Q96MV1 263 aa16.09■□□□□ 0.17
PNKP-209ENST00000596726 SCP2D1Q9UJQ7 156 aa16.09■□□□□ 0.17
PNKP-209ENST00000596726 LSM4Q9Y4Z0 139 aaKnown RBP16.09■□□□□ 0.17
PNKP-209ENST00000596726 MFSD2BA6NFX1 497 aa16.08■□□□□ 0.16
PNKP-209ENST00000596726 PPP5D1E7EU14 171 aa16.08■□□□□ 0.16
PNKP-209ENST00000596726 IGLV1-51P01701 117 aa16.08■□□□□ 0.16
PNKP-209ENST00000596726 IGHV3-23P01764 117 aa16.08■□□□□ 0.16
PNKP-209ENST00000596726 MFAP2P55001 183 aa16.08■□□□□ 0.16
PNKP-209ENST00000596726 IZUMO4Q1ZYL8 232 aa16.08■□□□□ 0.16
PNKP-209ENST00000596726 NAA60Q9H7X0 242 aa16.08■□□□□ 0.16
PNKP-209ENST00000596726 SIGLEC8Q9NYZ4 499 aa16.08■□□□□ 0.16
PNKP-209ENST00000596726 THYN1Q9P016 225 aa16.08■□□□□ 0.16
PNKP-209ENST00000596726 F11RQ9Y624 299 aaKnown RBP16.08■□□□□ 0.16
PNKP-209ENST00000596726 S4R3C0 116 aa16.08■□□□□ 0.16
PNKP-209ENST00000596726 DNAH9Q9NYC9 4486 aa16.07■□□□□ 0.16
PNKP-209ENST00000596726 TRBV7-1A0A0A6YYK4 115 aa16.07■□□□□ 0.16
PNKP-209ENST00000596726 TEX13DA0A0J9YY54 714 aaPredicted RBP16.07■□□□□ 0.16
PNKP-209ENST00000596726 CRYM-AS1A6NIL9 109 aa16.07■□□□□ 0.16
PNKP-209ENST00000596726 GGCTO75223 188 aaKnown RBP16.07■□□□□ 0.16
PNKP-209ENST00000596726 ATG12O94817 140 aa16.07■□□□□ 0.16
PNKP-209ENST00000596726 CDS2O95674 445 aa16.07■□□□□ 0.16
PNKP-209ENST00000596726 CSN3P07498 182 aa16.07■□□□□ 0.16
PNKP-209ENST00000596726 SPNP16150 400 aa16.07■□□□□ 0.16
PNKP-209ENST00000596726 HSPE1P61604 102 aaKnown RBP16.07■□□□□ 0.16
PNKP-209ENST00000596726 DCTN2Q13561 401 aaKnown RBP16.07■□□□□ 0.16
PNKP-209ENST00000596726 TRIM16LQ309B1 348 aa16.07■□□□□ 0.16
PNKP-209ENST00000596726 CLEC19AQ6UXS0 136 aa16.07■□□□□ 0.16
PNKP-209ENST00000596726 GLYATL2Q8WU03 294 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms