RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 KLK9Q9UKQ9 250 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 ANAPC10Q9UM13 185 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 TRAV6A0A075B6T7 132 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.93□□□□□ -1.14
LIG1-213ENST00000596672 ZNF785A8K8V0 405 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 RGS13O14921 159 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 KBTBD11O94819 623 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 TCRBP04435 133 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 CTXN2P0C2S0 81 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 ZNF735P0CB33 412 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 NAT1P18440 290 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 EXOSC2Q13868 293 aaKnown RBP7.93□□□□□ -1.14
LIG1-213ENST00000596672 ZNF818PQ6ZRF7 136 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 SSX9Q7RTT3 188 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 OR51S1Q8NGJ8 323 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 SECTM1Q8WVN6 248 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 TCTEX1D2Q8WW35 142 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 ZNF486Q96H40 463 aaPredicted RBP7.93□□□□□ -1.14
LIG1-213ENST00000596672 CCDC140Q96MF4 163 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 PHB2Q99623 299 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 TM2D3Q9BRN9 247 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 RSRP1Q9BUV0 290 aa7.93□□□□□ -1.14
LIG1-213ENST00000596672 A0A0G2JLM5 398 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 DISC1C4P0D8 188 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 INMT-MINDY4F8WBC2 141 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 OR2A4O95047 310 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 PPYP01298 95 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 CD74P04233 296 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 REG1AP05451 166 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 CRYGCP07315 174 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 H2AFB2P0C5Z0 115 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 ZP3P21754 424 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 GNRHRP30968 328 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 HRH1P35367 487 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 RNASE10Q5GAN6 216 aaKnown RBP7.92□□□□□ -1.14
LIG1-213ENST00000596672 MMD2Q8IY49 270 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 USMG5Q96IX5 58 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 OR2A7Q96R45 310 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 HSD17B10Q99714 261 aaKnown RBP7.92□□□□□ -1.14
LIG1-213ENST00000596672 WFDC10AQ9H1F0 79 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 FLVCR2Q9UPI3 526 aa7.92□□□□□ -1.14
LIG1-213ENST00000596672 IGLC7A0M8Q6 106 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 MFSD2BA6NFX1 497 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 A8MZ25 164 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 OR2C1O95371 312 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 IFNA6P05013 189 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 RPA2P15927 270 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 CTRB1P17538 263 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 RPL27AP46776 148 aaKnown RBP7.91□□□□□ -1.14
LIG1-213ENST00000596672 MFAP2P55001 183 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 FXYD4P59646 89 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 OR2B8PP59922 312 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 ATP5G2Q06055 141 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 MEF2DQ14814 521 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 C15orf32Q32M92 178 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 ZFP69Q49AA0 526 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 SCGB2B2Q4G0G5 96 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 ZNF585BQ52M93 769 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 CTRB2Q6GPI1 263 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 OR4A47Q6IF82 309 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 LINC00322Q6ZN03 302 aaPredicted RBP7.91□□□□□ -1.14
LIG1-213ENST00000596672 ZNF66Q6ZN08 573 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 SPAG16Q8N0X2 631 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 OR10W1Q8NGF6 305 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 OR5H2Q8NGV7 314 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 GIMAP1Q8WWP7 306 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 DEDD2Q8WXF8 326 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 CACNG8Q8WXS5 425 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 FYTTD1Q96QD9 318 aaKnown RBP7.91□□□□□ -1.14
LIG1-213ENST00000596672 MARVELD1Q9BSK0 173 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 ELOVL1Q9BW60 279 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 SLC5A7Q9GZV3 580 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 EDA2RQ9HAV5 297 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 SLC2A9Q9NRM0 540 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 NUDT15Q9NV35 164 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 SIGLEC8Q9NYZ4 499 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 COPZ2Q9P299 210 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 FBXL7Q9UJT9 491 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 PRELID3BQ9Y3B1 194 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 ALMS1Q8TCU4 4167 aa7.91□□□□□ -1.14
LIG1-213ENST00000596672 IGLV11-55A0A075B6I3 123 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 A0A0B4J293 547 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 FAM223BA6NKX1 122 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 DBX1A6NMT0 343 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 NPIPB5A8MRT5 1133 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 UPK2O00526 184 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 S1PR2O95136 353 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 NDUFB6O95139 128 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 CD7P09564 240 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 PSMB6P28072 239 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 ARPC4P59998 168 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 CD300CQ08708 224 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 POU2AF1Q16633 256 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 HAGHQ16775 308 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 DEFB114Q30KQ6 69 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 CD300EQ496F6 205 aaPredicted RBP7.9□□□□□ -1.14
LIG1-213ENST00000596672 CASC10Q5T4H9 136 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 DHRS11Q6UWP2 260 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 FAM223AQ8IWN6 122 aa7.9□□□□□ -1.14
LIG1-213ENST00000596672 NECAP1Q8NC96 275 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms