RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 AREGP15514 252 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 OR2B8PP59922 312 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 SP6Q3SY56 376 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 CCDC71LQ8N9Z2 235 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 RCHY1Q96PM5 261 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 SLA2Q9H6Q3 261 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 COA4Q9NYJ1 87 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 COPZ2Q9P299 210 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 NSG2Q9Y328 171 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 SORL1Q92673 2214 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 BRI3O95415 125 aa12.24□□□□□ -0.45
USHBP1-206ENST00000596436 LGALS1P09382 135 aaKnown RBP12.24□□□□□ -0.45
USHBP1-206ENST00000596436 AP3S2P59780 193 aa12.24□□□□□ -0.45
USHBP1-206ENST00000596436 ZNF45Q02386 682 aa12.24□□□□□ -0.45
USHBP1-206ENST00000596436 ZNF616Q08AN1 781 aa12.24□□□□□ -0.45
USHBP1-206ENST00000596436 ZNF429Q86V71 674 aa12.24□□□□□ -0.45
USHBP1-206ENST00000596436 TTC9CQ8N5M4 171 aa12.24□□□□□ -0.45
USHBP1-206ENST00000596436 OR1N2Q8NGR9 330 aa12.24□□□□□ -0.45
USHBP1-206ENST00000596436 TMEM230Q96A57 120 aa12.24□□□□□ -0.45
USHBP1-206ENST00000596436 SCP2D1Q9UJQ7 156 aa12.24□□□□□ -0.45
USHBP1-206ENST00000596436 C14orf166Q9Y224 244 aaKnown RBP12.24□□□□□ -0.45
USHBP1-206ENST00000596436 DBX1A6NMT0 343 aa12.23□□□□□ -0.45
USHBP1-206ENST00000596436 IGKV1-5P01602 117 aa12.23□□□□□ -0.45
USHBP1-206ENST00000596436 SERPINE2P07093 398 aa12.23□□□□□ -0.45
USHBP1-206ENST00000596436 FGF2P09038 288 aa12.23□□□□□ -0.45
USHBP1-206ENST00000596436 UCP1P25874 307 aa12.23□□□□□ -0.45
USHBP1-206ENST00000596436 CD40LGP29965 261 aa12.23□□□□□ -0.45
USHBP1-206ENST00000596436 FAUP35544 74 aaKnown RBP12.23□□□□□ -0.45
USHBP1-206ENST00000596436 IZUMO4Q1ZYL8 232 aa12.23□□□□□ -0.45
USHBP1-206ENST00000596436 CADM3Q8N126 398 aa12.23□□□□□ -0.45
USHBP1-206ENST00000596436 GDPD1Q8N9F7 314 aa12.23□□□□□ -0.45
USHBP1-206ENST00000596436 NAA60Q9H7X0 242 aa12.23□□□□□ -0.45
USHBP1-206ENST00000596436 IGHV4OR15-8A0A075B7B6 117 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 A0A087WW49 117 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 TEX50A0A1B0GTY4 177 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 IGLC7A0M8Q6 106 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 CRYM-AS1A6NIL9 109 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 NPIPB5A8MRT5 1133 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 REG1AP05451 166 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 ZNF57Q68EA5 555 aaPredicted RBP12.22□□□□□ -0.45
USHBP1-206ENST00000596436 OR10W1Q8NGF6 305 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 LHFPL5Q8TAF8 219 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 AKIP1Q9NQ31 210 aa12.22□□□□□ -0.45
USHBP1-206ENST00000596436 TRBV9A0A0B4J1U6 114 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 A0A0G2JRQ6 117 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 TEX13DA0A0J9YY54 714 aaPredicted RBP12.21□□□□□ -0.45
USHBP1-206ENST00000596436 LCE6AA0A183 80 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 C15orf61A6NNL5 157 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 CRYGCP07315 174 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 FRMD6-AS1P0C7T7 363 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 P0C879 139 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 IL7P13232 177 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 CTRB1P17538 263 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 PSMB6P28072 239 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 TRIM16LQ309B1 348 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 TRIQKQ629K1 86 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 CTRB2Q6GPI1 263 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 H2BFWTQ7Z2G1 175 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 GLYATL2Q8WU03 294 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 DCUN1D4Q92564 292 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 QTRT1Q9BXR0 403 aaKnown RBP12.21□□□□□ -0.45
USHBP1-206ENST00000596436 TMEM222Q9H0R3 208 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 TMEM14BQ9NUH8 114 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 ZNF257Q9Y2Q1 563 aa12.21□□□□□ -0.45
USHBP1-206ENST00000596436 C13orf42A0A1B0GVH6 325 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 OVOL1O14753 267 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 SNAPC5O75971 98 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 LY86O95711 162 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 RHOGP84095 191 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 WT1-ASQ06250 92 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 SLC25A42Q86VD7 318 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 OR1L8Q8NGR8 309 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 DEDD2Q8WXF8 326 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 FANCD2OSQ96PS1 177 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 CITED4Q96RK1 184 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 NDUFA4L2Q9NRX3 87 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 PRR13Q9NZ81 148 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 OR51B2Q9Y5P1 312 aa12.2□□□□□ -0.46
USHBP1-206ENST00000596436 LINC00854A0A1B0GVQ3 168 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 B3GALNT1O75752 331 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 OR2J3O76001 311 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 CDS2O95674 445 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 TRBV12-3P01733 135 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 TRAPPC2P0DI81 140 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 TRAPPC2BP0DI82 140 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 LYL1P12980 280 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 SLURP1P55000 103 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 SUPT4H1P63272 117 aaKnown RBP12.19□□□□□ -0.46
USHBP1-206ENST00000596436 DLX4Q92988 240 aaPredicted RBP12.19□□□□□ -0.46
USHBP1-206ENST00000596436 TSC22D3Q99576 134 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 SRSF8Q9BRL6 282 aaKnown RBP12.19□□□□□ -0.46
USHBP1-206ENST00000596436 HINT2Q9BX68 163 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 PRNDQ9UKY0 176 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 DMRT1Q9Y5R6 373 aa12.19□□□□□ -0.46
USHBP1-206ENST00000596436 A0A0G2JLM5 398 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 ANKRD34BA5PLL1 514 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 FAM223BA6NKX1 122 aa12.18□□□□□ -0.46
USHBP1-206ENST00000596436 LINC01619G3V211 115 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms