RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 DTD1Q8TEA8 209 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 C22orf15Q8WYQ4 148 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 SMIM8Q96KF7 97 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 RASL11BQ9BPW5 248 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 HIPK2Q9H2X6 1198 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 ZNF430Q9H8G1 570 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 TNFSF18Q9UNG2 199 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 TCF19Q9Y242 345 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 A0A0D9SG52 128 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 FAM24AA6NFZ4 105 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 H3BUX3 64 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 MYOD1P15172 320 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 HNF1AP20823 631 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 C4BPBP20851 252 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 RPL12P30050 165 aaKnown RBP10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 HOXA1P49639 335 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 CAV2P51636 162 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 AP2S1P53680 142 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 TAS2R30P59541 319 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 GNB1P62873 340 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 RPP30P78346 268 aaKnown RBP10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 TNXAQ16473 311 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 C5orf64Q2M2E5 130 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 LGALSLQ3ZCW2 172 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 OR2C3Q8N628 320 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 PIFOQ8TCI5 191 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 SLC25A31Q9H0C2 315 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 HEYLQ9NQ87 328 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 TPSG1Q9NRR2 321 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 PLSCR3Q9NRY6 295 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 HSPB11Q9Y547 144 aa10.41□□□□□ -0.74
SHKBP1-209ENST00000595803 MDFIC2A0A1B0GVS7 189 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 A0A1W2PN81 502 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 FCN1O00602 326 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 CNIH1O95406 144 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 HKR1P10072 659 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 CXCL2P19875 107 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 CHRNA7P36544 502 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 RPL27AP46776 148 aaKnown RBP10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 PAX9P55771 341 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 ERHP84090 104 aaKnown RBP10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 PRCDQ00LT1 54 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 PJVKQ0ZLH3 352 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 OR2F1Q13607 317 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 LY6EQ16553 131 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 SPANXN5Q5MJ07 72 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 C9orf62Q8N4C0 152 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 RBM14Q96PK6 669 aaKnown RBP10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 C11orf1Q9H5F2 150 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 PLEKHA3Q9HB20 300 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 PITPNC1Q9UKF7 332 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 WSB1Q9Y6I7 421 aa10.4□□□□□ -0.74
SHKBP1-209ENST00000595803 NOTCH1P46531 2555 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 A6NDX4 124 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 BTBD17A6NE02 478 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 TSC22D2O75157 780 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 CA2P00918 260 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 VDAC2P45880 294 aaPredicted RBP10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 MRGPRG-AS1Q2M3A8 158 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 FBLN7Q53RD9 439 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 Q6YL49 198 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 IL17RELQ6ZVW7 336 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 TMUB2Q71RG4 321 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 MRPL41Q8IXM3 137 aaKnown RBP10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 TMEM252Q8N6L7 170 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 Q8N9W7 124 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 AQP10Q96PS8 301 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 SLC25A33Q9BSK2 321 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 NDUFA4L2Q9NRX3 87 aa10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 LYRM2Q9NU23 88 aaPredicted RBP10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 PAIP2BQ9ULR5 123 aaKnown RBP10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 STRAPQ9Y3F4 350 aaKnown RBP10.39□□□□□ -0.75
SHKBP1-209ENST00000595803 TMEM50AO95807 157 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 IFNA10P01566 189 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 COMPP49747 757 aaPredicted RBP10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 FXYD3Q14802 87 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 LAMTOR1Q6IAA8 161 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 ZNF562Q6V9R5 426 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 TMEM219Q86XT9 240 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 KCNRGQ8N5I3 272 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 OR5R1Q8NH85 324 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 ARL6Q9H0F7 186 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 TMEM160Q9NX00 188 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 MOB4Q9Y3A3 225 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 U3KQ87 197 aa10.38□□□□□ -0.75
SHKBP1-209ENST00000595803 KANTRA0A1W2PQU2 76 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 RNF222A6NCQ9 220 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 MSGN1A6NI15 193 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 H3BP45 60 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 S100A11P31949 105 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 SNCAP37840 140 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 IER3P46695 156 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 RAB11AP62491 216 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 ZNF345Q14585 488 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 OPCMLQ14982 345 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 C10orf55Q5SWW7 151 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 C16orf82Q7Z2V1 217 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 PRDM13Q9H4Q3 707 aa10.37□□□□□ -0.75
SHKBP1-209ENST00000595803 IGSF23A1L1A6 192 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms