RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, human

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HOMER3-208	ENST00000595756	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.73	□□□□□ -0.21
HOMER3-208	ENST00000595756	C3orf84	H3BNL1	204 aa		13.73	□□□□□ -0.21
HOMER3-208	ENST00000595756	S1PR2	O95136	353 aa		13.73	□□□□□ -0.21
HOMER3-208	ENST00000595756	PJVK	Q0ZLH3	352 aa		13.73	□□□□□ -0.21
HOMER3-208	ENST00000595756	ZNF585B	Q52M93	769 aa		13.73	□□□□□ -0.21
HOMER3-208	ENST00000595756	C5orf66	Q9H5L9	145 aa		13.73	□□□□□ -0.21
HOMER3-208	ENST00000595756	ZNF355P	Q9NSJ1	428 aa		13.73	□□□□□ -0.21
HOMER3-208	ENST00000595756	LYST	Q99698	3801 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	PIGBOS1	A0A0B4J2F0	54 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	MARCH11	A6NNE9	402 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	IGLV1-51	P01701	117 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	FRMD6-AS1	P0C7T7	363 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	DHODH	Q02127	395 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	RBMS2	Q15434	407 aa	Known RBP	13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	TNXA	Q16473	311 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	OR4A47	Q6IF82	309 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	SSX9	Q7RTT3	188 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	SBSPON	Q8IVN8	264 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	SGPP2	Q8IWX5	399 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	VKORC1L1	Q8N0U8	176 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	TSC22D3	Q99576	134 aa		13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.72	□□□□□ -0.21
HOMER3-208	ENST00000595756	RPL8	P62917	257 aa	Known RBP	13.71	□□□□□ -0.21
HOMER3-208	ENST00000595756	OR5T1	Q8NG75	326 aa		13.71	□□□□□ -0.21
HOMER3-208	ENST00000595756	RCHY1	Q96PM5	261 aa		13.71	□□□□□ -0.21
HOMER3-208	ENST00000595756	SPIN2A	Q99865	258 aa		13.71	□□□□□ -0.21
HOMER3-208	ENST00000595756	SPIN2B	Q9BPZ2	258 aa		13.71	□□□□□ -0.21
HOMER3-208	ENST00000595756	NAA60	Q9H7X0	242 aa		13.71	□□□□□ -0.21
HOMER3-208	ENST00000595756	TMEM140	Q9NV12	185 aa		13.71	□□□□□ -0.21
HOMER3-208	ENST00000595756	CSMD3	Q7Z407	3707 aa		13.71	□□□□□ -0.22
HOMER3-208	ENST00000595756	CRYM-AS1	A6NIL9	109 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	UPK2	O00526	184 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	SNAPC5	O75971	98 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	KRAS	P01116	189 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	IL6R	P08887	468 aa	Predicted RBP	13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	ANXA3	P12429	323 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	UCP1	P25874	307 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	MRGPRG-AS1	Q2M3A8	158 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	TRIM16L	Q309B1	348 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	SRSF12	Q8WXF0	261 aa	Known RBP	13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	TP53RK	Q96S44	253 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	PHB2	Q99623	299 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	FKBP11	Q9NYL4	201 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	STARD9	Q9P2P6	4700 aa		13.7	□□□□□ -0.22
HOMER3-208	ENST00000595756	RYR2	Q92736	4967 aa		13.69	□□□□□ -0.22
HOMER3-208	ENST00000595756	HLA-G	P17693	338 aa		13.69	□□□□□ -0.22
HOMER3-208	ENST00000595756	G6PC	P35575	357 aa		13.69	□□□□□ -0.22
HOMER3-208	ENST00000595756	H2BFWT	Q7Z2G1	175 aa		13.69	□□□□□ -0.22
HOMER3-208	ENST00000595756	HAPLN4	Q86UW8	402 aa		13.69	□□□□□ -0.22
HOMER3-208	ENST00000595756	GALNT14	Q96FL9	552 aa		13.69	□□□□□ -0.22
HOMER3-208	ENST00000595756	USMG5	Q96IX5	58 aa		13.69	□□□□□ -0.22
HOMER3-208	ENST00000595756	COMMD5	Q9GZQ3	224 aa		13.69	□□□□□ -0.22
HOMER3-208	ENST00000595756	TMEM222	Q9H0R3	208 aa		13.69	□□□□□ -0.22
HOMER3-208	ENST00000595756	TNC	P24821	2201 aa		13.69	□□□□□ -0.22
HOMER3-208	ENST00000595756	LINC00854	A0A1B0GVQ3	168 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	MSGN1	A6NI15	193 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	LYRM1	O43325	122 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	AKR1C4	P17516	323 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	RPL27A	P46776	148 aa	Known RBP	13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	KLF5	Q13887	457 aa	Predicted RBP	13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	TMEM128	Q5BJH2	165 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	THOC7	Q6I9Y2	204 aa	Known RBP	13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	ZNF343	Q6P1L6	599 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	SLC25A42	Q86VD7	318 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	ADAD2	Q8NCV1	583 aa	Known RBP	13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	OR9G4	Q8NGQ1	327 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	SEC22A	Q96IW7	307 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	ZMAT4	Q9H898	229 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	COA4	Q9NYJ1	87 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	PRND	Q9UKY0	176 aa		13.68	□□□□□ -0.22
HOMER3-208	ENST00000595756	ANKRD34B	A5PLL1	514 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756		A8MZ25	164 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	NDUFB6	O95139	128 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	CDS2	O95674	445 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	OR5AC1	P0C628	307 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	UBE2M	P61081	183 aa	Known RBP	13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	SRPX	P78539	464 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	DEFA5	Q01523	94 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	SP6	Q3SY56	376 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	TMED4	Q7Z7H5	227 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	CENPS	Q8N2Z9	138 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	MUC7	Q8TAX7	377 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	GLYATL2	Q8WU03	294 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	IL22RA2	Q969J5	263 aa		13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	RRNAD1	Q96FB5	475 aa	Known RBP	13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	SRSF8	Q9BRL6	282 aa	Known RBP	13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	PEF1	Q9UBV8	284 aa	Known RBP	13.67	□□□□□ -0.22
HOMER3-208	ENST00000595756	PLA2G10	O15496	165 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	IGKV1-39	P01597	117 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	IGKV1D-39	P04432	117 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	OR9G9	P0C7N8	305 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	IGHV4-30-4	P0DP06	118 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	CCR6	P51684	374 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	AKR1C2	P52895	323 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	MZT2B	Q6NZ67	158 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	FAM219A	Q8IW50	185 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756		Q8N1Y9	231 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	OR4A16	Q8NH70	328 aa		13.66	□□□□□ -0.22
HOMER3-208	ENST00000595756	RBPMS	Q93062	196 aa	Known RBP	13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms