RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 DCAF16Q9NXF7 216 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 TCF19Q9Y242 345 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 TNCP24821 2201 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 DSCAMO60469 2012 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 ZNF705FA8MVS1 300 aaPredicted RBP12.6□□□□□ -0.39
ZNF541-205ENST00000595558 ZNF705DP0CH99 300 aaPredicted RBP12.6□□□□□ -0.39
ZNF541-205ENST00000595558 ZNF705BP0CI00 300 aaPredicted RBP12.6□□□□□ -0.39
ZNF541-205ENST00000595558 LOXL3P58215 753 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 FAM27E3Q08E93 113 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 EFNB3Q15768 340 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 TMEM249Q2WGJ8 235 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 AARDQ4LEZ3 155 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 IGFL2Q6UWQ7 119 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 Q6ZWC4 215 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 MOB3BQ86TA1 216 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 SARAFQ96BY9 339 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 NEU1Q99519 415 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 FAM215AQ9Y5M1 114 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 PTPRQQ9UMZ3 2332 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 YLPM1P49750 1951 aaKnown RBP12.6□□□□□ -0.39
ZNF541-205ENST00000595558 KLK10O43240 276 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 ACTL6BO94805 426 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 CXorf1O96002 111 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 CGAP01215 116 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 ADH4P08319 380 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 G0S2P27469 103 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 GCHFRP30047 84 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 ZNF90Q03938 601 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 STPG3Q8N7X2 389 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 DEFB108BQ8NET1 73 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 TBX15Q96SF7 602 aa12.6□□□□□ -0.39
ZNF541-205ENST00000595558 LSM4Q9Y4Z0 139 aaKnown RBP12.6□□□□□ -0.39
ZNF541-205ENST00000595558 SPINK4O60575 86 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 CDKN1AP38936 164 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 LBHQ53QV2 105 aaPredicted RBP12.59□□□□□ -0.39
ZNF541-205ENST00000595558 KRTCAP3Q53RY4 240 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 ASPHD1Q5U4P2 390 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 SNRNP40Q96DI7 357 aaKnown RBP12.59□□□□□ -0.39
ZNF541-205ENST00000595558 PLSCR4Q9NRQ2 329 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 PROCRQ9UNN8 238 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 COL6A6A6NMZ7 2263 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 ZNF891A8MT65 544 aaPredicted RBP12.59□□□□□ -0.39
ZNF541-205ENST00000595558 ERVFC1-1P60608 527 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 C1orf194Q5T5A4 169 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 BHLHA15Q7RTS1 189 aaPredicted RBP12.59□□□□□ -0.39
ZNF541-205ENST00000595558 OR4P4Q8NGL7 312 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 CMTM2Q8TAZ6 248 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 HINT2Q9BX68 163 aa12.59□□□□□ -0.39
ZNF541-205ENST00000595558 SERF1AO75920 110 aa12.58□□□□□ -0.39
ZNF541-205ENST00000595558 IGFBP2P18065 325 aa12.58□□□□□ -0.39
ZNF541-205ENST00000595558 YPEL3P61236 119 aaPredicted RBP12.58□□□□□ -0.39
ZNF541-205ENST00000595558 ZNF124Q15973 351 aa12.58□□□□□ -0.39
ZNF541-205ENST00000595558 S1PR3Q99500 378 aa12.58□□□□□ -0.39
ZNF541-205ENST00000595558 MPDU1O75352 247 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 GATA2P23769 480 aaPredicted RBP12.58□□□□□ -0.4
ZNF541-205ENST00000595558 RPL29P47914 159 aaKnown RBP12.58□□□□□ -0.4
ZNF541-205ENST00000595558 TMPRSS3P57727 454 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 MOGAT3Q86VF5 341 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 MRPL18Q9H0U6 180 aaKnown RBP12.58□□□□□ -0.4
ZNF541-205ENST00000595558 RNF114Q9Y508 228 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 IER3P46695 156 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 CASP6P55212 293 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 ERVK-16P61578 105 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 MIR17HGQ75NE6 70 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 GCSAMQ8N6F7 178 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 ZCCHC14Q8WYQ9 949 aaKnown RBP12.58□□□□□ -0.4
ZNF541-205ENST00000595558 NPVFQ9HCQ7 196 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 ZNRD1Q9P1U0 126 aa12.58□□□□□ -0.4
ZNF541-205ENST00000595558 KIR2DL5BA0A0G2JN68 375 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 KIR2DL5BA0A0G2JPC4 375 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 YPEL1O60688 119 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 CA2P00918 260 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 SLC35B1P78383 322 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 TOMM20LQ6UXN7 152 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 KIR2DL5AQ8N109 375 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 ZADH2Q8N4Q0 377 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 YPEL2Q96QA6 119 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 SPTAN1Q13813 2472 aaKnown RBP12.57□□□□□ -0.4
ZNF541-205ENST00000595558 RPP30P78346 268 aaKnown RBP12.57□□□□□ -0.4
ZNF541-205ENST00000595558 CYB5R2Q6BCY4 276 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 FAM216AQ8WUB2 273 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 DDB2Q92466 427 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 OR2V2Q96R30 315 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 IL36BQ9NZH7 164 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 SLC25A15Q9Y619 301 aa12.57□□□□□ -0.4
ZNF541-205ENST00000595558 MED13LQ71F56 2210 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 OR10J1P30954 320 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 CT45A1Q5HYN5 189 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 OR4A47Q6IF82 309 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 TEPPQ6URK8 271 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 OR1L6Q8NGR2 347 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 OR52E5Q8NH55 327 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 CT45A3Q8NHU0 189 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 HSPB9Q9BQS6 159 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 TMEM106BQ9NUM4 274 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 JPT1Q9UK76 154 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 SRRM5B3KS81 715 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 MLANAQ16655 118 aa12.56□□□□□ -0.4
ZNF541-205ENST00000595558 ZNF705AQ6ZN79 300 aaPredicted RBP12.56□□□□□ -0.4
ZNF541-205ENST00000595558 DOLPP1Q86YN1 238 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms