RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 FGF2P09038 288 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 OR13C7P0DN81 318 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 TBPP20226 339 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 PPP5CP53041 499 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 TAS2R19P59542 299 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 WT1-ASQ06250 92 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 IL18Q14116 193 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 SCGB2B2Q4G0G5 96 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 FAAP20Q6NZ36 180 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 STEAP1BQ6NZ63 245 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 TERB2Q8NHR7 220 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 EEF1AKMT3Q96AZ1 226 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 SEC22AQ96IW7 307 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 SRSF8Q9BRL6 282 aaKnown RBP11.23□□□□□ -0.61
USE1-205ENST00000594724 NDUFA4L2Q9NRX3 87 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 FAM212BQ9NTI7 297 aaPredicted RBP11.23□□□□□ -0.61
USE1-205ENST00000594724 CEPT1Q9Y6K0 416 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 COL7A1Q02388 2944 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 GGCTO75223 188 aaKnown RBP11.22□□□□□ -0.61
USE1-205ENST00000594724 SERPINE2P07093 398 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 PTBP1P26599 531 aaKnown RBP eCLIP11.22□□□□□ -0.61
USE1-205ENST00000594724 ARL3P36405 182 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 PIGPP57054 158 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 RND3P61587 244 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
USE1-205ENST00000594724 FAM209BQ5JX69 171 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 ADAMTSL5Q6ZMM2 481 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 CADM3Q8N126 398 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 MRGPRFQ96AM1 343 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 SLIRPQ9GZT3 109 aaKnown RBP11.22□□□□□ -0.61
USE1-205ENST00000594724 ZC4H2Q9NQZ6 224 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 PEMTQ9UBM1 199 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 PRNDQ9UKY0 176 aa11.22□□□□□ -0.61
USE1-205ENST00000594724 IZUMO1RA6ND01 250 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 CLEC3BP05452 202 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 EDN2P20800 178 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 SSBP1Q04837 148 aaKnown RBP11.21□□□□□ -0.61
USE1-205ENST00000594724 THOC7Q6I9Y2 204 aaKnown RBP11.21□□□□□ -0.61
USE1-205ENST00000594724 SLC25A24Q6NUK1 477 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 H2BFWTQ7Z2G1 175 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 GDPD1Q8N9F7 314 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 OR13C8Q8NGS7 320 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 MARCH1Q8TCQ1 289 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 SMIM4Q8WVI0 70 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 ZNF486Q96H40 463 aaPredicted RBP11.21□□□□□ -0.61
USE1-205ENST00000594724 TP53RKQ96S44 253 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 TSC22D3Q99576 134 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 TMEM14BQ9NUH8 114 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 SIGLEC8Q9NYZ4 499 aa11.21□□□□□ -0.61
USE1-205ENST00000594724 SORL1Q92673 2214 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 TRBV7-1A0A0A6YYK4 115 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 C15orf61A6NNL5 157 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 CTDSPLO15194 276 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 TNFSF8P32971 234 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 MECP2P51608 486 aaKnown RBP11.2□□□□□ -0.62
USE1-205ENST00000594724 MFAP2P55001 183 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 IZUMO4Q1ZYL8 232 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 SP6Q3SY56 376 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 HSD17B13Q7Z5P4 300 aaPredicted RBP11.2□□□□□ -0.62
USE1-205ENST00000594724 Q8N1Y9 231 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 OR4A16Q8NH70 328 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 MCFD2Q8NI22 146 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 ZNF502Q8TBZ5 544 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 ZFAND1Q8TCF1 268 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 LSM10Q969L4 123 aaKnown RBP11.2□□□□□ -0.62
USE1-205ENST00000594724 CXorf58Q96LI9 332 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 FKBP11Q9NYL4 201 aa11.2□□□□□ -0.62
USE1-205ENST00000594724 IGHV3-21A0A0B4J1V1 117 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 C3orf85A0A1B0GTC6 90 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 ZNF320A2RRD8 509 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 CCDC160A6NGH7 325 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 H0Y980 276 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 NHLRC4P0CG21 123 aaPredicted RBP11.19□□□□□ -0.62
USE1-205ENST00000594724 GPR183P32249 361 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 MEF2DQ14814 521 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 GPHB5Q86YW7 130 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 OR4C16Q8NGL9 310 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 OR5B3Q8NH48 314 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 TMEM56Q96MV1 263 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 NXF2Q9GZY0 626 aaKnown RBP11.19□□□□□ -0.62
USE1-205ENST00000594724 THYN1Q9P016 225 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 COPZ2Q9P299 210 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 RABL2AQ9UBK7 228 aaPredicted RBP11.19□□□□□ -0.62
USE1-205ENST00000594724 RABL2BQ9UNT1 228 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 F11RQ9Y624 299 aaKnown RBP11.19□□□□□ -0.62
USE1-205ENST00000594724 SELENOKQ9Y6D0 94 aa11.19□□□□□ -0.62
USE1-205ENST00000594724 IGHV3-35A0A0C4DH35 117 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 FABP12A6NFH5 140 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 C2orf70A6NJV1 201 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 DISC1C4P0D8 188 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 LGALS9O00182 355 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 CYB5BO43169 146 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 IGKV1-5P01602 117 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 CTSDP07339 412 aaPredicted RBP11.18□□□□□ -0.62
USE1-205ENST00000594724 FRMD6-AS1P0C7T7 363 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 AKAIN1P0CW23 69 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 FOLR2P14207 255 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 CD300EQ496F6 205 aaPredicted RBP11.18□□□□□ -0.62
USE1-205ENST00000594724 FAM106AQ4KMX7 169 aa11.18□□□□□ -0.62
USE1-205ENST00000594724 LCN12Q6JVE5 192 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms