RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
RANBP3-229ENST00000592771 TRAV9-1A0A075B6T8 112 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 KBTBD11-OT1A0A1B0GTJ5 212 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 E7EQL1 145 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 FCGR3BO75015 233 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 CXorf1O96002 111 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 STAG3L2P0CL84 134 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 STAG3L3P0CL85 134 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 NPPCP23582 126 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 RAB7AP51149 207 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.71□□□□□ -0.53
RANBP3-229ENST00000592771 DEFB108BQ8NET1 73 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 CORO2AQ92828 525 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 RNASE6Q93091 150 aaKnown RBP11.71□□□□□ -0.53
RANBP3-229ENST00000592771 CCL13Q99616 98 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 IFI27L2Q9H2X8 130 aa11.71□□□□□ -0.53
RANBP3-229ENST00000592771 ARFGEF3Q5TH69 2177 aa11.71□□□□□ -0.54
RANBP3-229ENST00000592771 PRSS46E5RG02 174 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 RD3LP0DJH9 198 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 GZMBP10144 247 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 CHRNB4P30926 498 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 GNB1P62873 340 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 EFNB3Q15768 340 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 LTC4SQ16873 150 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 TMEM30BQ3MIR4 351 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 TREML4Q6UXN2 200 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 TMEM144Q7Z5S9 345 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 FAM216BQ8N7L0 139 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 PLPPR2Q96GM1 343 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 S1PR3Q99500 378 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 ELOVL1Q9BW60 279 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 HEYLQ9NQ87 328 aaPredicted RBP11.7□□□□□ -0.54
RANBP3-229ENST00000592771 PKDREJQ9NTG1 2253 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 TRGV10A0A0A0MS01 117 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 FNDC10F2Z333 226 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 ZNF134P52741 427 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 SSTP61278 116 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 RELBQ01201 579 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 HNF4GQ14541 408 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 ZCCHC24Q8N2G6 241 aaKnown RBP11.7□□□□□ -0.54
RANBP3-229ENST00000592771 SAP30LQ9HAJ7 183 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 NPVFQ9HCQ7 196 aa11.7□□□□□ -0.54
RANBP3-229ENST00000592771 A0A087X0M5 115 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 TRAV38-1A0A0B4J264 116 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.69□□□□□ -0.54
RANBP3-229ENST00000592771 A0A1B0GX30 115 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 TMEM178BH3BS89 294 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 CCL21O00585 134 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 MT-CO2P00403 227 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 CNN1P51911 297 aaKnown RBP11.69□□□□□ -0.54
RANBP3-229ENST00000592771 LY6DQ14210 128 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 CST9LP1Q5W188 147 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 ZNF600Q6ZNG1 722 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 OR4S2Q8NH73 311 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 FUT9Q9Y231 359 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 LY96Q9Y6Y9 160 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 ARL2-SNX15V9GYD0 113 aa11.69□□□□□ -0.54
RANBP3-229ENST00000592771 NKX6-3A6NJ46 265 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 M0R1X1 148 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 TNFRSF13BO14836 293 aaPredicted RBP11.68□□□□□ -0.54
RANBP3-229ENST00000592771 RPL15P61313 204 aaKnown RBP11.68□□□□□ -0.54
RANBP3-229ENST00000592771 RAB31Q13636 194 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 BEND2Q8NDZ0 799 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 NEUROG1Q92886 237 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 GGTLC1Q9BX51 225 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 LSM4Q9Y4Z0 139 aaKnown RBP11.68□□□□□ -0.54
RANBP3-229ENST00000592771 PXMP4Q9Y6I8 212 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 ATRXP46100 2492 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 MDFIC2A0A1B0GVS7 189 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 SLC31A2O15432 143 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 NDUFB4O95168 129 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 CD3EP07766 207 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 IL3RAP26951 378 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 APOBEC3AP31941 199 aaPredicted RBP11.68□□□□□ -0.54
RANBP3-229ENST00000592771 LINC00205P59089 165 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 ADORA2A-AS1P86434 159 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 SSX2Q16385 188 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 SPINK9Q5DT21 86 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 UTF1Q5T230 341 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 ZNF439Q8NDP4 499 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 TMEM37Q8WXS4 190 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 DDB2Q92466 427 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 SFRP2Q96HF1 295 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 ADTRPQ96IZ2 230 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 MGST2Q99735 147 aa11.68□□□□□ -0.54
RANBP3-229ENST00000592771 HCFC1P51610 2035 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 FAM90A27PA6NNH2 459 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 SFTPCP11686 197 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 ATP5G3P48201 142 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 ATP5IP56385 69 aaPredicted RBP11.67□□□□□ -0.54
RANBP3-229ENST00000592771 RHOBP62745 196 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 MEF2CQ06413 473 aaPredicted RBP11.67□□□□□ -0.54
RANBP3-229ENST00000592771 CT45A1Q5HYN5 189 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 FAM78BQ5VT40 261 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 SSX9Q7RTT3 188 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 CT45A3Q8NHU0 189 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 MS4A5Q9H3V2 200 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 TMEM106BQ9NUM4 274 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 TMEM140Q9NV12 185 aa11.67□□□□□ -0.54
RANBP3-229ENST00000592771 IDI2-AS1Q9NZ38 188 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms