RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 SCP2D1Q9UJQ7 156 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 TRAPPC2LQ9UL33 140 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 BTRCQ9Y297 605 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 ZNF256Q9Y2P7 627 aaPredicted RBP4.53□□□□□ -1.68
VMP1-215ENST00000592619 ZNF106Q9H2Y7 1883 aaKnown RBP4.52□□□□□ -1.69
VMP1-215ENST00000592619 LRRK1Q38SD2 2015 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 CACNA1HO95180 2353 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 ZFP92A6NM28 416 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 GNG7O60262 68 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 ZNF780AO75290 641 aaPredicted RBP4.52□□□□□ -1.69
VMP1-215ENST00000592619 MMP23AO75900 390 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 NRASP01111 189 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 PTHP01270 115 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 HBZP02008 142 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 LGALS1P09382 135 aaKnown RBP4.52□□□□□ -1.69
VMP1-215ENST00000592619 CXCL3P19876 107 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 FGF7P21781 194 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 EMP1P54849 157 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 H2BFSP57053 126 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 HBG1P69891 147 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 HBG2P69892 147 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 SSX1Q16384 188 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 C1orf100Q5SVJ3 147 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 AVPI1Q5T686 147 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 SPINK14Q6IE38 97 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 CROCCP2Q86T23 111 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 C20orf196Q8IYI0 205 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 CEND1Q8N111 149 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 C9orf62Q8N4C0 152 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 DEFB119Q8N690 84 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 LINC00612Q8N6U2 182 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 OR1L1Q8NH94 360 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 BLNKQ8WV28 456 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 MBD3L1Q8WWY6 194 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 TMEM101Q96IK0 257 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 TRIB3Q96RU7 358 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 CHST6Q9GZX3 395 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 MRPL16Q9NX20 251 aaKnown RBP4.52□□□□□ -1.69
VMP1-215ENST00000592619 METTL1Q9UBP6 276 aaKnown RBP4.52□□□□□ -1.69
VMP1-215ENST00000592619 ZNF230Q9UIE0 474 aaPredicted RBP4.52□□□□□ -1.69
VMP1-215ENST00000592619 MCTS1Q9ULC4 181 aaKnown RBP4.52□□□□□ -1.69
VMP1-215ENST00000592619 SNX12Q9UMY4 172 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 PKIGQ9Y2B9 76 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 LAMTOR2Q9Y2Q5 125 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 KCNE3Q9Y6H6 103 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 DCHS1Q96JQ0 3298 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 SCN8AQ9UQD0 1980 aa4.52□□□□□ -1.69
VMP1-215ENST00000592619 ZNF292O60281 2723 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 LOC285095A0A1B0GVY8 99 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 NPIPB7O75200 414 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 PIAS1O75925 651 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 CXCL2P19875 107 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 RPS3P23396 243 aaKnown RBP eCLIP4.51□□□□□ -1.694e-6■■■■□ 22.6
VMP1-215ENST00000592619 MYCNOSP40205 109 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 GPR6P46095 362 aaPredicted RBP4.51□□□□□ -1.69
VMP1-215ENST00000592619 GNG11P61952 73 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 EBPQ15125 230 aaKnown RBP4.51□□□□□ -1.69
VMP1-215ENST00000592619 FAM201AQ5SY85 155 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 ARL9Q6T311 187 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 Q6ZN92 141 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 OR4M1Q8NGD0 313 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 STARD4Q96DR4 205 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 RDH12Q96NR8 316 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 TP53RKQ96S44 253 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 NDFIP1Q9BT67 221 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 UQCC1Q9NVA1 299 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 AIG1Q9NVV5 245 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 KCNIP1Q9NZI2 227 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 TMEM131Q92545 1883 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 COL5A1P20908 1838 aaPredicted RBP4.51□□□□□ -1.69
VMP1-215ENST00000592619 ABCA7Q8IZY2 2146 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 WDR87Q6ZQQ6 2873 aa4.51□□□□□ -1.69
VMP1-215ENST00000592619 LRP4O75096 1905 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 ADAMTS9Q9P2N4 1935 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 TRAV30A0A087WSZ9 112 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 TRAV38-1A0A0B4J264 116 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 SPTY2D1-AS1A0A0U1RR47 76 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 ZNF726A6NNF4 738 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 A8MWP6 167 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 J3QT63 122 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 AIPO00170 330 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 UPK1AO00322 258 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 OR7C2O60412 319 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 NDUFC2O95298 119 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 OPN1SWP03999 348 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 SERPINE1P05121 402 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 MMP7P09237 267 aaPredicted RBP4.5□□□□□ -1.69
VMP1-215ENST00000592619 GGT1P19440 569 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 AZU1P20160 251 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 PRTN3P24158 256 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 CNTFRP26992 372 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 G6PCP35575 357 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 MTPNP58546 118 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 NCS1P62166 190 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 HIST1H1AQ02539 215 aaPredicted RBP4.5□□□□□ -1.69
VMP1-215ENST00000592619 MXD1Q05195 221 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 NUMA1Q14980 2115 aa4.5□□□□□ -1.69
VMP1-215ENST00000592619 ANKRD22Q5VYY1 191 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms