RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 CLCF1Q9UBD9 225 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 V9GYV3 84 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 F2RL2O00254 374 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 FCN1O00602 326 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 ZNF134P52741 427 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 FAM214BQ7L5A3 538 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 MMD2Q8IY49 270 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 NUDT11Q96G61 164 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 CELSR3Q9NYQ7 3312 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 C15orf61A6NNL5 157 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 FOXH1O75593 365 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 AGFG2O95081 481 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 PRR20EP86478 221 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 PRR20CP86479 221 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 PRR20DP86480 221 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 PRR20BP86481 221 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 PRR20AP86496 221 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 RAB31Q13636 194 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 GUSBP1Q15486 140 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 PLPPR2Q96GM1 343 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 RPLP1P05386 114 aaKnown RBP12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 OR10J4P0C629 311 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 TMEM183BQ1AE95 376 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 GCNT2Q8N0V5 402 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 FAM234AQ9H0X4 552 aa12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 SLC25A10Q9UBX3 287 aaPredicted RBP12.24□□□□□ -0.45
SMARCA4-219ENST00000592604 IGKV1D-17A0A075B6S4 117 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 FNDC10F2Z333 226 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 MGST3O14880 152 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 NPY1RP25929 384 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 IER3P46695 156 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 COMPP49747 757 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 FABP6P51161 128 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 BAGE3Q86Y29 109 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 BAGE2Q86Y30 109 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 OR4P4Q8NGL7 312 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 LRFN3Q9BTN0 628 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 SNURFLB1AK76 121 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 CDKN1AP38936 164 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 HSPE1P61604 102 aaKnown RBP12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 MBNL2Q5VZF2 373 aaKnown RBP12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 OR4S2Q8NH73 311 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 SFXN3Q9BWM7 321 aa12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 FOXA2Q9Y261 457 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-219ENST00000592604 PRR14LQ5THK1 2151 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 SRRM5B3KS81 715 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 FRMD6-AS1P0C7T7 363 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 LINC00869P0C866 280 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 IRF2P14316 349 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 MZT1Q08AG7 82 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 C1orf162Q8NEQ5 155 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 PPP1R35Q8TAP8 253 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 NEUROG1Q92886 237 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 TMEM14BQ9NUH8 114 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 FZR1Q9UM11 496 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 KNTC1P50748 2209 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 CGAP01215 116 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 CECR9P0C854 216 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 C1orf229Q6ZS94 237 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 LRP11Q86VZ4 500 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 C1orf210Q8IVY1 113 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 CORO2AQ92828 525 aa12.22□□□□□ -0.45
SMARCA4-219ENST00000592604 F2Z2F3 143 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 MT-ND6P03923 174 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 TMEM178AQ8NBL3 297 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 ST6GALNAC3Q8NDV1 305 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 VAMP8Q9BV40 100 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 TMEM167BQ9NRX6 74 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 DUSP13Q9UII6 198 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 SAA2-SAA4A0A096LPE2 208 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 A0A1W2PN81 502 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 HELTA6NFD8 242 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 CA2P00918 260 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 GPX1P07203 203 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 CX3CL1P78423 397 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 RPL19P84098 196 aaKnown RBP12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 OR5I1Q13606 314 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 LPAL2Q16609 132 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 COX19Q49B96 90 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 OR8I2Q8N0Y5 310 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 VN1R17PQ8TDU5 208 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 SAMD10Q9BYL1 202 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 CLEC5AQ9NY25 188 aa12.21□□□□□ -0.45
SMARCA4-219ENST00000592604 VSTM5A8MXK1 200 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 IGLV1-44P01699 117 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 CGB3P0DN86 165 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 CGB7P0DN87 165 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 IGFBP2P18065 325 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 COL8A2P25067 703 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 CFHR2P36980 270 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 OR4A47Q6IF82 309 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 MIR17HGQ75NE6 70 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 PRO3102Q9H379 93 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 OSTCQ9NRP0 149 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 IL19Q9UHD0 177 aa12.21□□□□□ -0.46
SMARCA4-219ENST00000592604 C19orf67A6NJJ6 358 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 GNG4P50150 75 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 RAB7AP51149 207 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 CENPWQ5EE01 88 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 VPS25Q9BRG1 176 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms