RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 HARBI1Q96MB7 349 aa16.02■□□□□ 0.16
MBD3-209ENST00000592012 PXMP4Q9Y6I8 212 aa16.02■□□□□ 0.16
MBD3-209ENST00000592012 CHD8Q9HCK8 2581 aa16.02■□□□□ 0.16
MBD3-209ENST00000592012 LYNX1G3V0Z9 82 aa16.02■□□□□ 0.15
MBD3-209ENST00000592012 LYNX1P0DP58 116 aa16.02■□□□□ 0.15
MBD3-209ENST00000592012 COL8A2P25067 703 aa16.02■□□□□ 0.15
MBD3-209ENST00000592012 IQCF2Q8IXL9 164 aa16.02■□□□□ 0.15
MBD3-209ENST00000592012 OR5B3Q8NH48 314 aa16.02■□□□□ 0.15
MBD3-209ENST00000592012 COL6A6A6NMZ7 2263 aa16.02■□□□□ 0.15
MBD3-209ENST00000592012 PAGE4O60829 102 aa16.01■□□□□ 0.15
MBD3-209ENST00000592012 NDUFS6O75380 124 aaKnown RBP16.01■□□□□ 0.15
MBD3-209ENST00000592012 IGHV1-8P0DP01 117 aa16.01■□□□□ 0.15
MBD3-209ENST00000592012 ELOBQ15370 118 aa16.01■□□□□ 0.15
MBD3-209ENST00000592012 ZNF672Q499Z4 452 aaPredicted RBP16.01■□□□□ 0.15
MBD3-209ENST00000592012 TEPPQ6URK8 271 aa16.01■□□□□ 0.15
MBD3-209ENST00000592012 FLYWCH2Q96CP2 140 aaKnown RBP16.01■□□□□ 0.15
MBD3-209ENST00000592012 NABP2Q9BQ15 211 aa16.01■□□□□ 0.15
MBD3-209ENST00000592012 NCOR2Q9Y618 2525 aa16.01■□□□□ 0.15
MBD3-209ENST00000592012 A0A1W2PPV4 95 aa16.01■□□□□ 0.15
MBD3-209ENST00000592012 ZNF137PP52743 207 aa16.01■□□□□ 0.15
MBD3-209ENST00000592012 ZNF343Q6P1L6 599 aa16.01■□□□□ 0.15
MBD3-209ENST00000592012 DCHS2Q6V1P9 2916 aa16.01■□□□□ 0.15
MBD3-209ENST00000592012 OR4C13Q8NGP0 309 aa16■□□□□ 0.15
MBD3-209ENST00000592012 OR4F5Q8NH21 305 aa16■□□□□ 0.15
MBD3-209ENST00000592012 OR9G1Q8NH87 305 aa16■□□□□ 0.15
MBD3-209ENST00000592012 OR4F4Q96R69 305 aa16■□□□□ 0.15
MBD3-209ENST00000592012 SMIM7Q9BQ49 75 aa16■□□□□ 0.15
MBD3-209ENST00000592012 Q8WTZ3 238 aa16■□□□□ 0.15
MBD3-209ENST00000592012 SSMEM1Q8WWF3 244 aa16■□□□□ 0.15
MBD3-209ENST00000592012 TMEM242Q9NWH2 141 aa16■□□□□ 0.15
MBD3-209ENST00000592012 TRBV23-1A0A0A0MS06 115 aa15.99■□□□□ 0.15
MBD3-209ENST00000592012 FNDC10F2Z333 226 aa15.99■□□□□ 0.15
MBD3-209ENST00000592012 BSXQ3C1V8 233 aa15.99■□□□□ 0.15
MBD3-209ENST00000592012 PDPNQ86YL7 162 aa15.99■□□□□ 0.15
MBD3-209ENST00000592012 NAT8Q9UHE5 227 aa15.99■□□□□ 0.15
MBD3-209ENST00000592012 RALYQ9UKM9 306 aaKnown RBP15.99■□□□□ 0.15
MBD3-209ENST00000592012 PRELID1Q9Y255 219 aa15.99■□□□□ 0.15
MBD3-209ENST00000592012 URGCP-MRPS24S4R325 110 aa15.99■□□□□ 0.15
MBD3-209ENST00000592012 ATP5IP56385 69 aaPredicted RBP15.99■□□□□ 0.15
MBD3-209ENST00000592012 B2MP61769 119 aa15.99■□□□□ 0.15
MBD3-209ENST00000592012 ZNF841Q6ZN19 808 aa15.99■□□□□ 0.15
MBD3-209ENST00000592012 NDUFA4L2Q9NRX3 87 aa15.99■□□□□ 0.15
MBD3-209ENST00000592012 FSTL3O95633 263 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 RPL8P62917 257 aaKnown RBP15.98■□□□□ 0.15
MBD3-209ENST00000592012 TMEM241Q24JQ0 296 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 ZNF674Q2M3X9 581 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 C2orf83Q53S99 150 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 CYP2G1PQ6ZSU1 146 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 C1QL4Q86Z23 238 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 OR10W1Q8NGF6 305 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 RPUSD4Q96CM3 377 aaKnown RBP15.98■□□□□ 0.15
MBD3-209ENST00000592012 KCNIP2Q9NS61 270 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 CXCL1P09341 107 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 SNRPEP62304 92 aaKnown RBP15.98■□□□□ 0.15
MBD3-209ENST00000592012 STPG3Q8N7X2 389 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 ABHD5Q8WTS1 349 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 NEIL1Q96FI4 390 aaPredicted RBP15.98■□□□□ 0.15
MBD3-209ENST00000592012 TMEM204Q9BSN7 226 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 COMMD5Q9GZQ3 224 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 TMEM133Q9H2Q1 129 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 PARLQ9H300 379 aa15.98■□□□□ 0.15
MBD3-209ENST00000592012 E7EUB6 86 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 STAG3L2P0CL84 134 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 STAG3L3P0CL85 134 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 USF1P22415 310 aaPredicted RBP15.97■□□□□ 0.15
MBD3-209ENST00000592012 RPL29P47914 159 aaKnown RBP15.97■□□□□ 0.15
MBD3-209ENST00000592012 RAB31Q13636 194 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 TGIF2LXQ8IUE1 241 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 PCGF1Q9BSM1 259 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 WASHC3Q9Y3C0 194 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 TACC2O95359 2948 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 C11orf94C9JXX5 98 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 IGLV2-23P01705 113 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 IGHV2-70P01814 119 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 RNASE2P10153 161 aaKnown RBP15.97■□□□□ 0.15
MBD3-209ENST00000592012 IGFBP2P18065 325 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 OR1L8Q8NGR8 309 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 TMEM167AQ8TBQ9 72 aa15.97■□□□□ 0.15
MBD3-209ENST00000592012 C5orf52A6NGY3 159 aa15.96■□□□□ 0.15
MBD3-209ENST00000592012 MOB3BQ86TA1 216 aa15.96■□□□□ 0.15
MBD3-209ENST00000592012 LINC00518Q8N0U6 118 aa15.96■□□□□ 0.15
MBD3-209ENST00000592012 SPTBN1Q01082 2364 aaKnown RBP15.96■□□□□ 0.15
MBD3-209ENST00000592012 PLXNB1O43157 2135 aa15.96■□□□□ 0.15
MBD3-209ENST00000592012 CLDN34H7C241 214 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 ARL14EPLP0DKL9 152 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 NPPCP23582 126 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 RPS10P46783 165 aaKnown RBP15.95■□□□□ 0.14
MBD3-209ENST00000592012 AKR1D1P51857 326 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 RND2P52198 227 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 PRR20EP86478 221 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 PRR20CP86479 221 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 PRR20DP86480 221 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 PRR20BP86481 221 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 PRR20AP86496 221 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 SPNS3Q6ZMD2 512 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 TMEM144Q7Z5S9 345 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 OR4A5Q8NH83 315 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 VSTM2AQ8TAG5 236 aa15.95■□□□□ 0.14
MBD3-209ENST00000592012 SEPSECSQ9HD40 501 aaKnown RBP15.95■□□□□ 0.14
MBD3-209ENST00000592012 TGIF2-C20orf24A0A0A6YYL0 155 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms