RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 A0A0A6YYH2 397 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 IGHV3-35A0A0C4DH35 117 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 KIR2DL5BA0A0G2JN68 375 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 KIR2DL5BA0A0G2JPC4 375 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 TEX50A0A1B0GTY4 177 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 NUPR2A6NF83 97 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 A6NJ64 397 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 UBE2CO00762 179 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 S1PR2O95136 353 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 SDC2P34741 201 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 APOC4P55056 127 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 THOC7Q6I9Y2 204 aaKnown RBP8.68□□□□□ -1.02
CLIP3-204ENST00000590559 PLET1Q6UQ28 207 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 KIR2DL5AQ8N109 375 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 KIR2DL5BQ8NHK3 375 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 QTRT1Q9BXR0 403 aaKnown RBP8.68□□□□□ -1.02
CLIP3-204ENST00000590559 COMMD5Q9GZQ3 224 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 SLC5A7Q9GZV3 580 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 AUNIPQ9H7T9 357 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 HRASLSQ9HDD0 168 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 DAZ1Q9NQZ3 744 aaKnown RBP8.68□□□□□ -1.02
CLIP3-204ENST00000590559 NDUFA4L2Q9NRX3 87 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 TMEM140Q9NV12 185 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 THYN1Q9P016 225 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 RAB26Q9ULW5 256 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 ETV7Q9Y603 341 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 DNAH17Q9UFH2 4485 aa8.68□□□□□ -1.02
CLIP3-204ENST00000590559 TRAV18A0A075B6X5 111 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 K7EMT4 169 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 NDUFA4O00483 81 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 LY6G6CO95867 125 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 CLEC2LP0C7M8 214 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 GNRHRP30968 328 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 ADMP35318 185 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 ARPC4P59998 168 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 CATR1Q13166 79 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 PMS2P11Q13670 270 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 DEFB135Q30KP9 77 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 SPSB3Q6PJ21 355 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 DHRS11Q6UWP2 260 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 HSD17B13Q7Z5P4 300 aaPredicted RBP8.67□□□□□ -1.02
CLIP3-204ENST00000590559 SLC38A6Q8IZM9 456 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 OR5AP2Q8NGF4 316 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 CD300LFQ8TDQ1 290 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 BSCL2Q96G97 398 aaPredicted RBP8.67□□□□□ -1.02
CLIP3-204ENST00000590559 CHRDL1Q9BU40 450 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 VCX3BQ9H321 246 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 COMMD9Q9P000 198 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 UBQLN2Q9UHD9 624 aa8.67□□□□□ -1.02
CLIP3-204ENST00000590559 CXorf65A6NEN9 183 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 OR2T8A6NH00 312 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 MARCH11A6NNE9 402 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 K7EIM0 57 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 TRAPPC2P0DI81 140 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 TRAPPC2BP0DI82 140 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 SCARB1Q8WTV0 552 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 RNF167Q9H6Y7 350 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 MAP6D1Q9H9H5 199 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 ANAPC10Q9UM13 185 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 SSR3Q9UNL2 185 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 F11RQ9Y624 299 aaKnown RBP8.66□□□□□ -1.02
CLIP3-204ENST00000590559 PKHD1P08F94 4074 aa8.66□□□□□ -1.02
CLIP3-204ENST00000590559 CTSGP08311 255 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 OR13C7P0DN81 318 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 RPA2P15927 270 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 F2RP25116 425 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 PSMB9P28065 219 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 FXYD4P59646 89 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 MXD1Q05195 221 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 LAMTOR1Q6IAA8 161 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 DMBX1Q8NFW5 382 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 OR1L8Q8NGR8 309 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 OR51H1Q8NH63 302 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 FCGR1BQ92637 280 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 GALNT14Q96FL9 552 aa8.65□□□□□ -1.02
CLIP3-204ENST00000590559 C15orf62A8K5M9 175 aa8.64□□□□□ -1.03
CLIP3-204ENST00000590559 PGLYRP1O75594 196 aaPredicted RBP8.64□□□□□ -1.03
CLIP3-204ENST00000590559 NAT1P18440 290 aa8.64□□□□□ -1.03
CLIP3-204ENST00000590559 FCGR2BP31994 310 aaPredicted RBP8.64□□□□□ -1.03
CLIP3-204ENST00000590559 CBX5P45973 191 aa8.64□□□□□ -1.03
CLIP3-204ENST00000590559 SLC25A24Q6NUK1 477 aa8.64□□□□□ -1.03
CLIP3-204ENST00000590559 RPP25LQ8N5L8 163 aaKnown RBP8.64□□□□□ -1.03
CLIP3-204ENST00000590559 STPG3Q8N7X2 389 aa8.64□□□□□ -1.03
CLIP3-204ENST00000590559 LSM10Q969L4 123 aaKnown RBP8.64□□□□□ -1.03
CLIP3-204ENST00000590559 MOB3AQ96BX8 217 aa8.64□□□□□ -1.03
CLIP3-204ENST00000590559 OR10C1Q96KK4 312 aa8.64□□□□□ -1.03
CLIP3-204ENST00000590559 C21orf62Q9NYP8 219 aa8.64□□□□□ -1.03
CLIP3-204ENST00000590559 SMPXQ9UHP9 88 aa8.64□□□□□ -1.03
CLIP3-204ENST00000590559 OR4C46A6NHA9 309 aa8.63□□□□□ -1.03
CLIP3-204ENST00000590559 DBX1A6NMT0 343 aa8.63□□□□□ -1.03
CLIP3-204ENST00000590559 CYB5BO43169 146 aa8.63□□□□□ -1.03
CLIP3-204ENST00000590559 XRCC3O43542 346 aa8.63□□□□□ -1.03
CLIP3-204ENST00000590559 TMEM127O75204 238 aa8.63□□□□□ -1.03
CLIP3-204ENST00000590559 FCER2P06734 321 aa8.63□□□□□ -1.03
CLIP3-204ENST00000590559 CTSDP07339 412 aaPredicted RBP8.63□□□□□ -1.03
CLIP3-204ENST00000590559 IDNKQ5T6J7 187 aa8.63□□□□□ -1.03
CLIP3-204ENST00000590559 AADACL3Q5VUY0 350 aa8.63□□□□□ -1.03
CLIP3-204ENST00000590559 FAM90A2PQ658T7 463 aa8.63□□□□□ -1.03
CLIP3-204ENST00000590559 LGALS9CQ6DKI2 356 aa8.63□□□□□ -1.03
CLIP3-204ENST00000590559 TMEM17Q86X19 198 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms