RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ANKRD34BA5PLL1 514 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 MARCH11A6NNE9 402 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 CTDSPLO15194 276 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 CTRB1P17538 263 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 ZP3P21754 424 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 MRPS10P82664 201 aaKnown RBP8.58□□□□□ -1.04
SMAD4-211ENST00000590499 SSBP1Q04837 148 aaKnown RBP8.58□□□□□ -1.04
SMAD4-211ENST00000590499 PHLDA2Q53GA4 152 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 RNASE10Q5GAN6 216 aaKnown RBP8.58□□□□□ -1.04
SMAD4-211ENST00000590499 CTRB2Q6GPI1 263 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 LPCAT3Q6P1A2 487 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 ZNF429Q86V71 674 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 SLC25A42Q86VD7 318 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 SLC38A6Q8IZM9 456 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 ARRDC1Q8N5I2 433 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 TMEM229BQ8NBD8 167 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 NECAP1Q8NC96 275 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 OR4D10Q8NGI6 311 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 SMIM4Q8WVI0 70 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 FYTTD1Q96QD9 318 aaKnown RBP8.58□□□□□ -1.04
SMAD4-211ENST00000590499 NXF2Q9GZY0 626 aaKnown RBP8.58□□□□□ -1.04
SMAD4-211ENST00000590499 HRASLSQ9HDD0 168 aa8.58□□□□□ -1.04
SMAD4-211ENST00000590499 HUWE1Q7Z6Z7 4374 aaKnown RBP8.58□□□□□ -1.04
SMAD4-211ENST00000590499 IGLC7A0M8Q6 106 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 NOL3O60936 208 aaKnown RBP8.57□□□□□ -1.04
SMAD4-211ENST00000590499 RPA2P15927 270 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 PTBP1P26599 531 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMAD4-211ENST00000590499 PSMB6P28072 239 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 ECI1P42126 302 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 LPAR6P43657 344 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 TAS2R19P59542 299 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 RND3P61587 244 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 EXOSC2Q13868 293 aaKnown RBP8.57□□□□□ -1.04
SMAD4-211ENST00000590499 KLF5Q13887 457 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-211ENST00000590499 TBC1D26Q86UD7 250 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 DMBX1Q8NFW5 382 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 MRGPRFQ96AM1 343 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 DIRAS2Q96HU8 199 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 SOSTQ9BQB4 213 aa8.57□□□□□ -1.04
SMAD4-211ENST00000590499 RBM38Q9H0Z9 239 aaKnown RBP8.57□□□□□ -1.04
SMAD4-211ENST00000590499 PEF1Q9UBV8 284 aaKnown RBP8.57□□□□□ -1.04
SMAD4-211ENST00000590499 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.56□□□□□ -1.04
SMAD4-211ENST00000590499 SAP30O75446 220 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 OR2J3O76001 311 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 IGKV1-39P01597 117 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 IGKV1D-39P04432 117 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 IFNA6P05013 189 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 G6PCP35575 357 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 ERVK-16P61578 105 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 ATP5G2Q06055 141 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 C15orf32Q32M92 178 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 IL34Q6ZMJ4 242 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 ZNF486Q96H40 463 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-211ENST00000590499 PRR25Q96S07 402 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 SRSF8Q9BRL6 282 aaKnown RBP8.56□□□□□ -1.04
SMAD4-211ENST00000590499 COMMD5Q9GZQ3 224 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 C6orf62Q9GZU0 229 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-211ENST00000590499 RABL2AQ9UBK7 228 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-211ENST00000590499 RABL2BQ9UNT1 228 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 LSM4Q9Y4Z0 139 aaKnown RBP8.56□□□□□ -1.04
SMAD4-211ENST00000590499 DMRT1Q9Y5R6 373 aa8.56□□□□□ -1.04
SMAD4-211ENST00000590499 IGLV11-55A0A075B6I3 123 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 DPPA5A6NC42 116 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 BMPR1BO00238 502 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 GSTZ1O43708 216 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-211ENST00000590499 RAB3DO95716 219 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 KRASP01116 189 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 REG1AP05451 166 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 PI3P19957 117 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 S100GP29377 79 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 KRTAP10-2P60368 255 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 IL18Q14116 193 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 THOC7Q6I9Y2 204 aaKnown RBP8.55□□□□□ -1.04
SMAD4-211ENST00000590499 STEAP1BQ6NZ63 245 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 TERB2Q8NHR7 220 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 SEC22AQ96IW7 307 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 QTRT1Q9BXR0 403 aaKnown RBP8.55□□□□□ -1.04
SMAD4-211ENST00000590499 NDUFA4L2Q9NRX3 87 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 FBXL7Q9UJT9 491 aa8.55□□□□□ -1.04
SMAD4-211ENST00000590499 ZNF256Q9Y2P7 627 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-211ENST00000590499 TEX50A0A1B0GTY4 177 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 NDUFB8O95169 186 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 IGLV1-51P01701 117 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 PGAM2P15259 253 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 HIST1H1BP16401 226 aaKnown RBP8.54□□□□□ -1.04
SMAD4-211ENST00000590499 TNFSF8P32971 234 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 PPP5CP53041 499 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 PIGPP57054 158 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 SYNJ2BPP57105 145 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 WT1-ASQ06250 92 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 DCTN2Q13561 401 aaKnown RBP8.54□□□□□ -1.04
SMAD4-211ENST00000590499 MEF2DQ14814 521 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 FAM209BQ5JX69 171 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 FAAP20Q6NZ36 180 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 OR10W1Q8NGF6 305 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 OR9G4Q8NGQ1 327 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 OR1L8Q8NGR8 309 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 OR13C8Q8NGS7 320 aa8.54□□□□□ -1.04
SMAD4-211ENST00000590499 MCFD2Q8NI22 146 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms