RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, human

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-211	ENST00000590098	XRCC3	O43542	346 aa		13.44	□□□□□ -0.26
PRKCSH-211	ENST00000590098	TRAPPC2	P0DI81	140 aa		13.44	□□□□□ -0.26
PRKCSH-211	ENST00000590098	TRAPPC2B	P0DI82	140 aa		13.44	□□□□□ -0.26
PRKCSH-211	ENST00000590098	RPA2	P15927	270 aa		13.44	□□□□□ -0.26
PRKCSH-211	ENST00000590098	ELL	P55199	621 aa	Predicted RBP	13.44	□□□□□ -0.26
PRKCSH-211	ENST00000590098	THOC7	Q6I9Y2	204 aa	Known RBP	13.44	□□□□□ -0.26
PRKCSH-211	ENST00000590098	UNQ9165/PRO28630	Q6UXU0	137 aa		13.44	□□□□□ -0.26
PRKCSH-211	ENST00000590098	CROCCP3	Q8IVE0	287 aa		13.44	□□□□□ -0.26
PRKCSH-211	ENST00000590098	OR10W1	Q8NGF6	305 aa		13.44	□□□□□ -0.26
PRKCSH-211	ENST00000590098	EHF	Q9NZC4	300 aa		13.44	□□□□□ -0.26
PRKCSH-211	ENST00000590098	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.43	□□□□□ -0.26
PRKCSH-211	ENST00000590098	IGHV3-35	A0A0C4DH35	117 aa		13.43	□□□□□ -0.26
PRKCSH-211	ENST00000590098	C8orf88	P0DMB2	117 aa		13.43	□□□□□ -0.26
PRKCSH-211	ENST00000590098	OR13C7	P0DN81	318 aa		13.43	□□□□□ -0.26
PRKCSH-211	ENST00000590098	GNRHR	P30968	328 aa		13.43	□□□□□ -0.26
PRKCSH-211	ENST00000590098	SLC25A24	Q6NUK1	477 aa		13.43	□□□□□ -0.26
PRKCSH-211	ENST00000590098	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.43	□□□□□ -0.26
PRKCSH-211	ENST00000590098	GDPD1	Q8N9F7	314 aa		13.43	□□□□□ -0.26
PRKCSH-211	ENST00000590098	OR1L6	Q8NGR2	347 aa		13.43	□□□□□ -0.26
PRKCSH-211	ENST00000590098	VN1R17P	Q8TDU5	208 aa		13.43	□□□□□ -0.26
PRKCSH-211	ENST00000590098	ALMS1	Q8TCU4	4167 aa		13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	TEX50	A0A1B0GTY4	177 aa		13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	TGOLN2	O43493	480 aa		13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	SERPINE2	P07093	398 aa		13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	F2R	P25116	425 aa		13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	RFX2	P48378	723 aa		13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	DHRS11	Q6UWP2	260 aa		13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	SLC38A6	Q8IZM9	456 aa		13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	OR1L8	Q8NGR8	309 aa		13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	HINT2	Q9BX68	163 aa		13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.42	□□□□□ -0.26
PRKCSH-211	ENST00000590098	BIRC6	Q9NR09	4857 aa		13.41	□□□□□ -0.26
PRKCSH-211	ENST00000590098	MARCH11	A6NNE9	402 aa		13.41	□□□□□ -0.26
PRKCSH-211	ENST00000590098	RLN1	P04808	185 aa		13.41	□□□□□ -0.26
PRKCSH-211	ENST00000590098	UBE2NL	Q5JXB2	153 aa		13.41	□□□□□ -0.26
PRKCSH-211	ENST00000590098	TMEM69	Q5SWH9	247 aa		13.41	□□□□□ -0.26
PRKCSH-211	ENST00000590098	CMTM1	Q8IZ96	169 aa		13.41	□□□□□ -0.26
PRKCSH-211	ENST00000590098	OR2C3	Q8N628	320 aa		13.41	□□□□□ -0.26
PRKCSH-211	ENST00000590098	TSPAN14	Q8NG11	270 aa		13.41	□□□□□ -0.26
PRKCSH-211	ENST00000590098	OR5H2	Q8NGV7	314 aa		13.41	□□□□□ -0.26
PRKCSH-211	ENST00000590098	C5orf66	Q9H5L9	145 aa		13.41	□□□□□ -0.26
PRKCSH-211	ENST00000590098	OR2T8	A6NH00	312 aa		13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	PGLYRP1	O75594	196 aa	Predicted RBP	13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	SNAPC5	O75971	98 aa		13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	KRAS	P01116	189 aa		13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	PMP2	P02689	132 aa		13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	LPAR6	P43657	344 aa		13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	TAS2R46	P59540	309 aa		13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	WT1-AS	Q06250	92 aa		13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	KCTD21	Q4G0X4	260 aa		13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	LSM10	Q969L4	123 aa	Known RBP	13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	MOB3A	Q96BX8	217 aa		13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	BSCL2	Q96G97	398 aa	Predicted RBP	13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	OVOL2	Q9BRP0	275 aa		13.4	□□□□□ -0.26
PRKCSH-211	ENST00000590098	TAS2R20	P59543	309 aa		13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	LAMTOR1	Q6IAA8	161 aa		13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	SPSB3	Q6PJ21	355 aa		13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	SAMD12	Q8N8I0	201 aa		13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	FCAMR	Q8WWV6	532 aa		13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	TMEM190	Q8WZ59	177 aa		13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	DGCR14	Q96DF8	476 aa	Known RBP	13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	SPAG8	Q99932	426 aa	Predicted RBP	13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	DAZ1	Q9NQZ3	744 aa	Known RBP	13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	NDUFA4L2	Q9NRX3	87 aa		13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	C21orf62	Q9NYP8	219 aa		13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	OR51B2	Q9Y5P1	312 aa		13.39	□□□□□ -0.27
PRKCSH-211	ENST00000590098	PRSS3	P35030	304 aa		13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	G6PC	P35575	357 aa		13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	TGFBR1	P36897	503 aa		13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	RPS19	P39019	145 aa	Known RBP	13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	OR6F1	Q8NGZ6	308 aa		13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	TMEM56	Q96MV1	263 aa		13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	ATP6V0B	Q99437	205 aa		13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	C20orf24	Q9BUV8	137 aa		13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	FKBP11	Q9NYL4	201 aa		13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	ANAPC10	Q9UM13	185 aa		13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	NSG2	Q9Y328	171 aa		13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	F11R	Q9Y624	299 aa	Known RBP	13.38	□□□□□ -0.27
PRKCSH-211	ENST00000590098	IGHV3-21	A0A0B4J1V1	117 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	GPR31	O00270	319 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	NDUFA4	O00483	81 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	TSPAN4	O14817	238 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	NAT1	P18440	290 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	S100G	P29377	79 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	APOC4	P55056	127 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	CADM3	Q8N126	398 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	UBAC2	Q8NBM4	344 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	SCARB1	Q8WTV0	552 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	UBQLN2	Q9UHD9	624 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	PRND	Q9UKY0	176 aa		13.37	□□□□□ -0.27
PRKCSH-211	ENST00000590098	LSM3	P62310	102 aa	Known RBP	13.36	□□□□□ -0.27
PRKCSH-211	ENST00000590098		Q56UQ5	140 aa		13.36	□□□□□ -0.27
PRKCSH-211	ENST00000590098	OR5B3	Q8NH48	314 aa		13.36	□□□□□ -0.27
PRKCSH-211	ENST00000590098	TSC22D3	Q99576	134 aa		13.36	□□□□□ -0.27
PRKCSH-211	ENST00000590098	FXYD6	Q9H0Q3	95 aa		13.36	□□□□□ -0.27
PRKCSH-211	ENST00000590098	VCX3A	Q9NNX9	186 aa		13.36	□□□□□ -0.27
PRKCSH-211	ENST00000590098	HLA-DMA	P28067	261 aa		13.35	□□□□□ -0.27
PRKCSH-211	ENST00000590098	HRH1	P35367	487 aa		13.35	□□□□□ -0.27
PRKCSH-211	ENST00000590098	MFAP2	P55001	183 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms