RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 IGSF11Q5DX21 431 aa9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 APRG1Q8IVJ8 170 aa9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 EXTL2Q9UBQ6 330 aa9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 TRAV25A0A0B4J276 109 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 MEIS3P1A6NDR6 274 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 BET1O15155 118 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 SSX5O60225 188 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 GSTT2P0CG29 244 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 GSTT2BP0CG30 244 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 MYOD1P15172 320 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 DTYMKP23919 212 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 PRSS3P35030 304 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 RTL8BQ17RB0 113 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 FAM106AQ4KMX7 169 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 FAM209BQ5JX69 171 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 SNX29P2Q8IUI4 249 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 VKORC1L1Q8N0U8 176 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 SPIN2AQ99865 258 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 RARRES2Q99969 163 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 SPIN2BQ9BPZ2 258 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 SLIRPQ9GZT3 109 aaKnown RBP9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 MIXL1Q9H2W2 232 aa9.35□□□□□ -0.91
PRKCSH-210ENST00000589990 M0R2N4 97 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 FABP7O15540 132 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 HLA-DQB1P01920 261 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 FCER2P06734 321 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 DUTP33316 252 aaKnown RBP9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 MFAP2P55001 183 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 SLC38A6Q8IZM9 456 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 OR4A4PQ8NGN8 299 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 OR11H2Q8NH07 326 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 DIRAS2Q96HU8 199 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 SPAG8Q99932 426 aaPredicted RBP9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 PLA2G2EQ9NZK7 142 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 ZNF257Q9Y2Q1 563 aa9.34□□□□□ -0.91
PRKCSH-210ENST00000589990 IGKV1D-8A0A087WSZ0 117 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 TSPAN4O14817 238 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 REG1AP05451 166 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 CLEC3BP05452 202 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 RPA2P15927 270 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 GPR183P32249 361 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 CBX5P45973 191 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 CBX3Q13185 183 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 CDK10Q15131 360 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 OR2B11Q5JQS5 317 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 OR4A47Q6IF82 309 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 CNIH2Q6PI25 160 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 OR10J5Q8NHC4 309 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 CD300LFQ8TDQ1 290 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 FYTTD1Q96QD9 318 aaKnown RBP9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 NXF2Q9GZY0 626 aaKnown RBP9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 MFFQ9GZY8 342 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 C11orf68Q9H3H3 251 aaKnown RBP9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 C5orf66Q9H5L9 145 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 IFT46Q9NQC8 304 aa9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 MRPL27Q9P0M9 148 aaKnown RBP9.33□□□□□ -0.92
PRKCSH-210ENST00000589990 LRP1BQ9NZR2 4599 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 IGHV3OR16-8A0A075B7F1 116 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 A6NHS1 94 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 NPIPB5A8MRT5 1133 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 ACTL6BO94805 426 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 TNFSF8P32971 234 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 S100A5P33763 92 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 RNASE12Q5GAN4 147 aaKnown RBP9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 Q6ZS49 121 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 MMD2Q8IY49 270 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 ZNF645Q8N7E2 425 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 BEST4Q8NFU0 473 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 EEF1AKMT3Q96AZ1 226 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 GALNT14Q96FL9 552 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 GINS4Q9BRT9 223 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 ANXA10Q9UJ72 324 aa9.32□□□□□ -0.92
PRKCSH-210ENST00000589990 APOBP04114 4563 aaKnown RBP9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 CGB1A6NKQ9 187 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 J3QRK9 145 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 FCGR3BO75015 233 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 CTXN2P0C2S0 81 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 RRASP10301 218 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 TCTAP57738 103 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 ARPC4P59998 168 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 RPL30P62888 115 aaKnown RBP9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 IL18Q14116 193 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 HOGA1Q86XE5 327 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 OSR1Q8TAX0 266 aaPredicted RBP9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 C15orf40Q8WUR7 153 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 MARC2Q969Z3 335 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 CABLES2Q9BTV7 478 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 CSTL1Q9H114 145 aa9.31□□□□□ -0.92
PRKCSH-210ENST00000589990 IGLV11-55A0A075B6I3 123 aa9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 TRBV6-7A0A0A0MS04 114 aa9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 FABP12A6NFH5 140 aa9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 MPTX1A8MV57 137 aa9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 SULT1C2O00338 296 aa9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 ZNF207O43670 478 aaKnown RBP9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 CRYGCP07315 174 aa9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 ZNF735P0CB33 412 aa9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 PSMB6P28072 239 aa9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 RPL27AP46776 148 aaKnown RBP9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 SLC25A42Q86VD7 318 aa9.3□□□□□ -0.92
PRKCSH-210ENST00000589990 ZNF502Q8TBZ5 544 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms