RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 IFNA6P05013 189 aa13.5□□□□□ -0.25
H3F3B-209ENST00000589949 RFX2P48378 723 aa13.5□□□□□ -0.25
H3F3B-209ENST00000589949 TAS2R31P59538 309 aa13.5□□□□□ -0.25
H3F3B-209ENST00000589949 UXS1Q8NBZ7 420 aa13.5□□□□□ -0.25
H3F3B-209ENST00000589949 ZNF502Q8TBZ5 544 aa13.5□□□□□ -0.25
H3F3B-209ENST00000589949 EEF1AKMT3Q96AZ1 226 aa13.5□□□□□ -0.25
H3F3B-209ENST00000589949 TMEM140Q9NV12 185 aa13.5□□□□□ -0.25
H3F3B-209ENST00000589949 EPPK1P58107 5090 aaKnown RBP13.5□□□□□ -0.25
H3F3B-209ENST00000589949 DNAH1Q9P2D7 4330 aa13.49□□□□□ -0.25
H3F3B-209ENST00000589949 IGHV3-35A0A0C4DH35 117 aa13.49□□□□□ -0.25
H3F3B-209ENST00000589949 HPRT1P00492 218 aa13.49□□□□□ -0.25
H3F3B-209ENST00000589949 DEFA4P12838 97 aa13.49□□□□□ -0.25
H3F3B-209ENST00000589949 HIST1H1BP16401 226 aaKnown RBP13.49□□□□□ -0.25
H3F3B-209ENST00000589949 ANAPC10Q9UM13 185 aa13.49□□□□□ -0.25
H3F3B-209ENST00000589949 XRCC3O43542 346 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 SCAF4O95104 1147 aaKnown RBP13.48□□□□□ -0.25
H3F3B-209ENST00000589949 DHFRP00374 187 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 NQO2P16083 231 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 GPR183P32249 361 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 MFAP2P55001 183 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 WT1-ASQ06250 92 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 AADACL3Q5VUY0 350 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 ZNF57Q68EA5 555 aaPredicted RBP13.48□□□□□ -0.25
H3F3B-209ENST00000589949 MZT2AQ6P582 158 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 DHRS11Q6UWP2 260 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 C6orf62Q9GZU0 229 aaPredicted RBP13.48□□□□□ -0.25
H3F3B-209ENST00000589949 PLEKHA2Q9HB19 425 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 EHFQ9NZC4 300 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 HYDINQ4G0P3 5121 aa13.48□□□□□ -0.25
H3F3B-209ENST00000589949 TRBV7-1A0A0A6YYK4 115 aa13.47□□□□□ -0.25
H3F3B-209ENST00000589949 TEX50A0A1B0GTY4 177 aa13.47□□□□□ -0.25
H3F3B-209ENST00000589949 PGLYRP1O75594 196 aaPredicted RBP13.47□□□□□ -0.25
H3F3B-209ENST00000589949 C8orf88P0DMB2 117 aa13.47□□□□□ -0.25
H3F3B-209ENST00000589949 S100A5P33763 92 aa13.47□□□□□ -0.25
H3F3B-209ENST00000589949 CBX5P45973 191 aa13.47□□□□□ -0.25
H3F3B-209ENST00000589949 CATR1Q13166 79 aa13.47□□□□□ -0.25
H3F3B-209ENST00000589949 FAM106AQ4KMX7 169 aa13.47□□□□□ -0.25
H3F3B-209ENST00000589949 BTNL8Q6UX41 500 aa13.47□□□□□ -0.25
H3F3B-209ENST00000589949 QTRT1Q9BXR0 403 aaKnown RBP13.47□□□□□ -0.25
H3F3B-209ENST00000589949 PMP2P02689 132 aa13.46□□□□□ -0.25
H3F3B-209ENST00000589949 RLN1P04808 185 aa13.46□□□□□ -0.25
H3F3B-209ENST00000589949 ZNF585BQ52M93 769 aa13.46□□□□□ -0.25
H3F3B-209ENST00000589949 LYSMD2Q8IV50 215 aa13.46□□□□□ -0.25
H3F3B-209ENST00000589949 DMBX1Q8NFW5 382 aa13.46□□□□□ -0.25
H3F3B-209ENST00000589949 FCAMRQ8WWV6 532 aa13.46□□□□□ -0.25
H3F3B-209ENST00000589949 MOB3AQ96BX8 217 aa13.46□□□□□ -0.25
H3F3B-209ENST00000589949 CXorf58Q96LI9 332 aa13.46□□□□□ -0.25
H3F3B-209ENST00000589949 AIFM2Q9BRQ8 373 aa13.46□□□□□ -0.25
H3F3B-209ENST00000589949 ZNF2Q9BSG1 426 aaPredicted RBP13.46□□□□□ -0.25
H3F3B-209ENST00000589949 COMMD5Q9GZQ3 224 aa13.46□□□□□ -0.25
H3F3B-209ENST00000589949 CTDSP2O14595 271 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 NAT1P18440 290 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 PTBP1P26599 531 aaKnown RBP eCLIP13.45□□□□□ -0.26
H3F3B-209ENST00000589949 TAS2R20P59543 309 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 HERV-K104P61576 105 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 SAMD12Q8N8I0 201 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 S100ZQ8WXG8 99 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 S100A16Q96FQ6 103 aaKnown RBP13.45□□□□□ -0.26
H3F3B-209ENST00000589949 ZNF414Q96IQ9 312 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 SRSF8Q9BRL6 282 aaKnown RBP13.45□□□□□ -0.26
H3F3B-209ENST00000589949 FXYD6Q9H0Q3 95 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 IFT46Q9NQC8 304 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 COMMD9Q9P000 198 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 NSG2Q9Y328 171 aa13.45□□□□□ -0.26
H3F3B-209ENST00000589949 DBX1A6NMT0 343 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 MARCH11A6NNE9 402 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 F8W735 103 aaPredicted RBP13.44□□□□□ -0.26
H3F3B-209ENST00000589949 SERPINE2P07093 398 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 FGF2P09038 288 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 OR13C7P0DN81 318 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 LPAR6P43657 344 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 UBE2NLQ5JXB2 153 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 GDPD1Q8N9F7 314 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 OR52B4Q8NGK2 314 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 CD300LFQ8TDQ1 290 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 ZNF436Q9C0F3 470 aaPredicted RBP13.44□□□□□ -0.26
H3F3B-209ENST00000589949 NDUFA4L2Q9NRX3 87 aa13.44□□□□□ -0.26
H3F3B-209ENST00000589949 IGHV3-21A0A0B4J1V1 117 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 RGS5O15539 181 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 KRASP01116 189 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 TRAPPC2P0DI81 140 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 TRAPPC2BP0DI82 140 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 F2RP25116 425 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 G6PCP35575 357 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 TMEM69Q5SWH9 247 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 PLET1Q6UQ28 207 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 SLC16A13Q7RTY0 426 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 VN1R17PQ8TDU5 208 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 CHRDL1Q9BU40 450 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 COMMD3Q9UBI1 195 aa13.43□□□□□ -0.26
H3F3B-209ENST00000589949 OR2T8A6NH00 312 aa13.42□□□□□ -0.26
H3F3B-209ENST00000589949 TGOLN2O43493 480 aa13.42□□□□□ -0.26
H3F3B-209ENST00000589949 EIF4EP06730 217 aaKnown RBP13.42□□□□□ -0.26
H3F3B-209ENST00000589949 TNFSF8P32971 234 aa13.42□□□□□ -0.26
H3F3B-209ENST00000589949 ADMP35318 185 aa13.42□□□□□ -0.26
H3F3B-209ENST00000589949 OR1L8Q8NGR8 309 aa13.42□□□□□ -0.26
H3F3B-209ENST00000589949 CMTM3Q96MX0 182 aa13.42□□□□□ -0.26
H3F3B-209ENST00000589949 OVOL2Q9BRP0 275 aa13.42□□□□□ -0.26
H3F3B-209ENST00000589949 MIXL1Q9H2W2 232 aa13.42□□□□□ -0.26
H3F3B-209ENST00000589949 PLECQ15149 4684 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms