RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PSMB8P28062 276 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 IDH3GP51553 393 aaPredicted RBP1.28□□□□□ -2.2
SMAD4-207ENST00000589076 TMEM258P61165 79 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 EMX1Q04741 257 aaPredicted RBP1.28□□□□□ -2.2
SMAD4-207ENST00000589076 GLO1Q04760 184 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 OR10K2Q6IF99 312 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 CD200R1LQ6Q8B3 271 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 LYZL1Q6UWQ5 148 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 ZNF550Q7Z398 422 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 SLC22A24Q8N4F4 322 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 OPTNQ96CV9 577 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 XAGE1AQ9HD64 81 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 GPR84Q9NQS5 396 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 AK3Q9UIJ7 227 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 PRELID1Q9Y255 219 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 COQ4Q9Y3A0 265 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 PXMP4Q9Y6I8 212 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 RTTNQ86VV8 2226 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 COL7A1Q02388 2944 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 RAPGEF6Q8TEU7 1601 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 A0A0J9YW62 118 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 ISG15P05161 165 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 RPS12P25398 132 aaKnown RBP1.27□□□□□ -2.21
SMAD4-207ENST00000589076 ALDH3A1P30838 453 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 TPI1P60174 286 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 NAA20P61599 178 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 IQCF2Q8IXL9 164 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 C10orf67Q8IYJ2 551 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 DEFB125Q8N687 156 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 PACRGLQ8N7B6 248 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 GPR32P1Q8NGA4 272 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 OR51T1Q8NGJ9 327 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 DIRAS2Q96HU8 199 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 CXorf21Q9HAI6 301 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 CEP290O15078 2479 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 FAM186AA6NE01 2351 aa1.27□□□□□ -2.21
SMAD4-207ENST00000589076 SNAPC4Q5SXM2 1469 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 ACANP16112 2415 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 EVC2Q86UK5 1308 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 A0A1B0GVG6 124 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 CREBL2O60519 120 aaPredicted RBP1.26□□□□□ -2.21
SMAD4-207ENST00000589076 DCTN3O75935 186 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 GPX1P07203 203 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 CCR7P32248 378 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 MAP2K4P45985 399 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 HAAOP46952 286 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 MARCKSL1P49006 195 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 TNFAIP6P98066 277 aaPredicted RBP1.26□□□□□ -2.21
SMAD4-207ENST00000589076 CAV1Q03135 178 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 FABP9Q0Z7S8 132 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 ZNF791Q3KP31 576 aaPredicted RBP1.26□□□□□ -2.21
SMAD4-207ENST00000589076 COQ5Q5HYK3 327 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 TMEM42Q69YG0 159 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 GID4Q8IVV7 300 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 OR1L8Q8NGR8 309 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 SGMS2Q8NHU3 365 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 SPACA4Q8TDM5 124 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 SLC7A6Q92536 515 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 PTH2Q96A98 100 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 ARL5BQ96KC2 179 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 MRPS26Q9BYN8 205 aaKnown RBP1.26□□□□□ -2.21
SMAD4-207ENST00000589076 RBM7Q9Y580 266 aaKnown RBP1.26□□□□□ -2.21
SMAD4-207ENST00000589076 TIMM9Q9Y5J7 89 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 NIPBLQ6KC79 2804 aaeCLIP1.26□□□□□ -2.212e-7■□□□□ 8.6
SMAD4-207ENST00000589076 PCDH15Q96QU1 1955 aa1.26□□□□□ -2.21
SMAD4-207ENST00000589076 FLT4P35916 1363 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 CCDC88AQ3V6T2 1871 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 LRBAP50851 2863 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 KIF13BQ9NQT8 1826 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 A0A1B0GV50 99 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 ZNF705FA8MVS1 300 aaPredicted RBP1.25□□□□□ -2.21
SMAD4-207ENST00000589076 LST1O00453 97 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 PLA2G10O15496 165 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 CALB1P05937 261 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 CCR2P41597 374 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 REG1BP48304 166 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 RAB5BP61020 215 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 POLR2GP62487 172 aaKnown RBP eCLIP1.25□□□□□ -2.21
SMAD4-207ENST00000589076 RPL30P62888 115 aaKnown RBP1.25□□□□□ -2.21
SMAD4-207ENST00000589076 TNFAIP8L3Q5GJ75 292 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 SSX8Q7RTT4 187 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 KTN1-AS1Q86SY8 53 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 LRRC28Q86X40 367 aaPredicted RBP1.25□□□□□ -2.21
SMAD4-207ENST00000589076 C10orf126Q8N4M7 172 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 TBC1D19Q8N5T2 526 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 OR8B12Q8NGG6 310 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 ASB17Q8WXJ9 295 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 ROPN1LQ96C74 230 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 IMMP2LQ96T52 175 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 DOHHQ9BU89 302 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 OR51I1Q9H343 314 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 FAM96AQ9H5X1 160 aa1.25□□□□□ -2.21
SMAD4-207ENST00000589076 PRRC2BQ5JSZ5 2229 aaKnown RBP1.25□□□□□ -2.21
SMAD4-207ENST00000589076 BRWD1Q9NSI6 2320 aa1.24□□□□□ -2.21
SMAD4-207ENST00000589076 DOCK5Q9H7D0 1870 aa1.24□□□□□ -2.21
SMAD4-207ENST00000589076 DCCP43146 1447 aa1.24□□□□□ -2.21
SMAD4-207ENST00000589076 CCDC88CQ9P219 2028 aa1.24□□□□□ -2.21
SMAD4-207ENST00000589076 TRAV7A0A075B6U4 112 aa1.24□□□□□ -2.21
SMAD4-207ENST00000589076 TMEM269A0A1B0GVZ9 245 aa1.24□□□□□ -2.21
SMAD4-207ENST00000589076 A8MUN3 132 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms