RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 IQCF2Q8IXL9 164 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 MALSU1Q96EH3 234 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 TMEM204Q9BSN7 226 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 COMMD5Q9GZQ3 224 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 TMPRSS5Q9H3S3 457 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 WASHC3Q9Y3C0 194 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 C2orf83Q53S99 150 aa12.42□□□□□ -0.42
MBD1-217ENST00000588937 TGIF2LXQ8IUE1 241 aa12.42□□□□□ -0.42
MBD1-217ENST00000588937 OR1L8Q8NGR8 309 aa12.42□□□□□ -0.42
MBD1-217ENST00000588937 ST6GALNAC6Q969X2 333 aa12.42□□□□□ -0.42
MBD1-217ENST00000588937 RAB1BQ9H0U4 201 aa12.42□□□□□ -0.42
MBD1-217ENST00000588937 TMEM133Q9H2Q1 129 aa12.42□□□□□ -0.42
MBD1-217ENST00000588937 SAV1Q9H4B6 383 aaPredicted RBP12.42□□□□□ -0.42
MBD1-217ENST00000588937 SDF2L1Q9HCN8 221 aa12.42□□□□□ -0.42
MBD1-217ENST00000588937 TMEM242Q9NWH2 141 aa12.42□□□□□ -0.42
MBD1-217ENST00000588937 COL6A6A6NMZ7 2263 aa12.42□□□□□ -0.42
MBD1-217ENST00000588937 A0A1W2PN81 502 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 INS-IGF2F8WCM5 200 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 SIAH2O43255 324 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 COL8A2P25067 703 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 CHRNA7P36544 502 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 PRRX1P54821 245 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 RPL8P62917 257 aaKnown RBP12.41□□□□□ -0.42
MBD1-217ENST00000588937 ERHP84090 104 aaKnown RBP12.41□□□□□ -0.42
MBD1-217ENST00000588937 ARSJQ5FYB0 599 aaPredicted RBP12.41□□□□□ -0.42
MBD1-217ENST00000588937 NAT8Q9UHE5 227 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 NBASA2RRP1 2371 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 EIF3GO75821 320 aaKnown RBP eCLIP12.41□□□□□ -0.42
MBD1-217ENST00000588937 IGHV2-70P01814 119 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 RBP4P02753 201 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 MYOD1P15172 320 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 RPL29P47914 159 aaKnown RBP12.41□□□□□ -0.42
MBD1-217ENST00000588937 REG1BP48304 166 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 B2MP61769 119 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 WDR25Q64LD2 544 aaPredicted RBP12.41□□□□□ -0.42
MBD1-217ENST00000588937 OR4F5Q8NH21 305 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 NANPQ8TBE9 248 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 TMEM167AQ8TBQ9 72 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 YPEL4Q96NS1 127 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 OR4F4Q96R69 305 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 SMIM7Q9BQ49 75 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 NDUFA4L2Q9NRX3 87 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 ARFGEF3Q5TH69 2177 aa12.41□□□□□ -0.42
MBD1-217ENST00000588937 YIF1AO95070 293 aa12.4□□□□□ -0.42
MBD1-217ENST00000588937 CXorf1O96002 111 aa12.4□□□□□ -0.42
MBD1-217ENST00000588937 HABP2Q14520 560 aaPredicted RBP12.4□□□□□ -0.42
MBD1-217ENST00000588937 BSXQ3C1V8 233 aa12.4□□□□□ -0.42
MBD1-217ENST00000588937 VMA21Q3ZAQ7 101 aa12.4□□□□□ -0.42
MBD1-217ENST00000588937 MIC13Q5XKP0 118 aa12.4□□□□□ -0.42
MBD1-217ENST00000588937 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
MBD1-217ENST00000588937 CTDSP1Q9GZU7 261 aa12.4□□□□□ -0.42
MBD1-217ENST00000588937 hCG_1809904A0A1W2PP81 198 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 A0A1W2PR64 198 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 A0A1W2PRV1 198 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 PDE6DO43924 150 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 PAGE4O60829 102 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 OPN1MWP04001 364 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 OPN1MW2P0DN77 364 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 OPN1MW3P0DN78 364 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 AGAP20933 346 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 LGALS7P47929 136 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 RHOBP62745 196 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 TMEM241Q24JQ0 296 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 CYP2G1PQ6ZSU1 146 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 TMEM144Q7Z5S9 345 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 OR8B3Q8NGG8 313 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 OR8B2Q96RD0 313 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 PATZ1Q9HBE1 687 aaKnown RBP12.39□□□□□ -0.43
MBD1-217ENST00000588937 MIOXQ9UGB7 285 aa12.39□□□□□ -0.43
MBD1-217ENST00000588937 STAG3L2P0CL84 134 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 STAG3L3P0CL85 134 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 ZNF841Q6ZN19 808 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 C1QL4Q86Z23 238 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 ZFP82Q8N141 532 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 C11orf42Q8N5U0 333 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 STPG3Q8N7X2 389 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 C1orf159Q96HA4 380 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 CBLN4Q9NTU7 201 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 IGSF10Q6WRI0 2623 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 KALRNO60229 2985 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 C11orf94C9JXX5 98 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 LYNX1G3V0Z9 82 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 CLDN34H7C241 214 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 MT-CO2P00403 227 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 S100A6P06703 90 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 LYNX1P0DP58 116 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 RNASE2P10153 161 aaKnown RBP12.38□□□□□ -0.43
MBD1-217ENST00000588937 SUB1P53999 127 aaKnown RBP eCLIP12.38□□□□□ -0.43
MBD1-217ENST00000588937 ZNF674Q2M3X9 581 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 GCSAMLQ5JQS6 135 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 C8orf46Q8TAG6 207 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 CACNG8Q8WXS5 425 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 TIMD4Q96H15 378 aa12.38□□□□□ -0.43
MBD1-217ENST00000588937 IGHV2-26A0A0B4J1V2 119 aa12.37□□□□□ -0.43
MBD1-217ENST00000588937 PPIAL4CA0A0B4J2A2 164 aa12.37□□□□□ -0.43
MBD1-217ENST00000588937 F6UZH7 168 aa12.37□□□□□ -0.43
MBD1-217ENST00000588937 PPIAL4GP0DN37 164 aa12.37□□□□□ -0.43
MBD1-217ENST00000588937 GPX4P36969 197 aaPredicted RBP12.37□□□□□ -0.43
MBD1-217ENST00000588937 ELOBQ15370 118 aa12.37□□□□□ -0.43
MBD1-217ENST00000588937 MRPL41Q8IXM3 137 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms