RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 TMEM144Q7Z5S9 345 aa5.9□□□□□ -1.46
SPIDR-228ENST00000588781 TMEM183AQ8IXX5 376 aa5.9□□□□□ -1.46
SPIDR-228ENST00000588781 HIST3H2BBQ8N257 126 aa5.9□□□□□ -1.46
SPIDR-228ENST00000588781 RBMXL3Q8N7X1 1067 aaKnown RBP5.9□□□□□ -1.46
SPIDR-228ENST00000588781 ZNF439Q8NDP4 499 aa5.9□□□□□ -1.46
SPIDR-228ENST00000588781 OR51G1Q8NGK1 321 aa5.9□□□□□ -1.46
SPIDR-228ENST00000588781 CACNG8Q8WXS5 425 aa5.9□□□□□ -1.46
SPIDR-228ENST00000588781 TMEM190Q8WZ59 177 aa5.9□□□□□ -1.46
SPIDR-228ENST00000588781 MGST2Q99735 147 aa5.9□□□□□ -1.46
SPIDR-228ENST00000588781 MRPL32Q9BYC8 188 aaKnown RBP5.9□□□□□ -1.46
SPIDR-228ENST00000588781 MS4A5Q9H3V2 200 aa5.9□□□□□ -1.46
SPIDR-228ENST00000588781 TECRQ9NZ01 308 aaKnown RBP5.9□□□□□ -1.46
SPIDR-228ENST00000588781 LSM4Q9Y4Z0 139 aaKnown RBP5.9□□□□□ -1.46
SPIDR-228ENST00000588781 PTPN13Q12923 2485 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 UBR5O95071 2799 aaPredicted RBP5.89□□□□□ -1.47
SPIDR-228ENST00000588781 URB1O60287 2271 aaKnown RBP5.89□□□□□ -1.47
SPIDR-228ENST00000588781 PPIAL4EA0A075B759 164 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 C17orf100A8MU93 164 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 C9JCJ5 164 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 PRSS46E5RG02 174 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 PPIAL4DF5H284 164 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 DVL1O14640 695 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 RRHO14718 337 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 NDUFB3O43676 98 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 PROP1O75360 226 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 CA2P00918 260 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 TFF1P04155 84 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 ARL14EPLP0DKL9 152 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 PPIAL4FP0DN26 164 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 BMP5P22003 454 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 GCHFRP30047 84 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 MC5RP33032 325 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 FOXL1Q12952 345 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 MSMPQ1L6U9 139 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 COA6Q5JTJ3 125 aaKnown RBP5.89□□□□□ -1.47
SPIDR-228ENST00000588781 PDPNQ86YL7 162 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 WFDC8Q8IUA0 241 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 LINC00311Q8N616 119 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF383Q8NA42 475 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 TMEM170AQ8WVE7 144 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 FRZBQ92765 325 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 NEUROG1Q92886 237 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 C11orf52Q96A22 123 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 TMEM186Q96B77 213 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF714Q96N38 554 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 CCL13Q99616 98 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 PCGF1Q9BSM1 259 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 HINT2Q9BX68 163 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 COMMD5Q9GZQ3 224 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 GSN-AS1Q9NRJ2 163 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 MIOXQ9UGB7 285 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 PPIAL4AQ9Y536 164 aa5.89□□□□□ -1.47
SPIDR-228ENST00000588781 CHD3Q12873 2000 aaKnown RBP5.88□□□□□ -1.47
SPIDR-228ENST00000588781 TRBV23-1A0A0A0MS06 115 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 A0A1W2PPQ1 181 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 TSTD3H0UI37 97 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 J3QKU1 62 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 ATXN7O15265 892 aaPredicted RBP5.88□□□□□ -1.47
SPIDR-228ENST00000588781 SLC31A2O15432 143 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 GATCO43716 136 aaKnown RBP5.88□□□□□ -1.47
SPIDR-228ENST00000588781 YIF1AO95070 293 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 GCGP01275 180 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 GNG10P50151 68 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF134P52741 427 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 CASP6P55212 293 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 RPS16P62249 146 aaKnown RBP5.88□□□□□ -1.47
SPIDR-228ENST00000588781 SELENOTP62341 195 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 RPL31P62899 125 aaKnown RBP5.88□□□□□ -1.47
SPIDR-228ENST00000588781 EFNB3Q15768 340 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 VMA21Q3ZAQ7 101 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 TMEM177Q53S58 311 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 MIC13Q5XKP0 118 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 ETFRF1Q6IPR1 90 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 FAM53AQ6NSI3 398 aaPredicted RBP5.88□□□□□ -1.47
SPIDR-228ENST00000588781 GFRALQ6UXV0 394 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF833PQ6ZTB9 187 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 LINC01551Q86U37 167 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 ABHD12Q8N2K0 398 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF843Q8N446 348 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 STPG3Q8N7X2 389 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 DEFB108BQ8NET1 73 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 OR10G8Q8NGN5 311 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 OR10D4PQ8NGN7 298 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 OR1L4Q8NGR5 311 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 OR1P1Q8NH06 330 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 OR4X1Q8NH49 305 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 OR5R1Q8NH85 324 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 RNASEH2CQ8TDP1 164 aaKnown RBP5.88□□□□□ -1.47
SPIDR-228ENST00000588781 C22orf15Q8WYQ4 148 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 TNFRSF14Q92956 283 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 TMEM18Q96B42 140 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 FLYWCH2Q96CP2 140 aaKnown RBP5.88□□□□□ -1.47
SPIDR-228ENST00000588781 SFRP2Q96HF1 295 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 SAP30LQ9HAJ7 183 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 FUT9Q9Y231 359 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 RAXQ9Y2V3 346 aa5.88□□□□□ -1.47
SPIDR-228ENST00000588781 KIAA2026Q5HYC2 2103 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 TEP1Q99973 2627 aaKnown RBP5.87□□□□□ -1.47
SPIDR-228ENST00000588781 TRBV9A0A0B4J1U6 114 aa5.87□□□□□ -1.47
SPIDR-228ENST00000588781 XKRY2A2RUG3 117 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms