RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 OR2T8A6NH00 312 aa13.58□□□□□ -0.24
CCDC43-204ENST00000588687 NQO2P16083 231 aa13.58□□□□□ -0.24
CCDC43-204ENST00000588687 ADMP35318 185 aa13.58□□□□□ -0.24
CCDC43-204ENST00000588687 ZBTB34Q8NCN2 500 aa13.58□□□□□ -0.24
CCDC43-204ENST00000588687 CHRDL1Q9BU40 450 aa13.58□□□□□ -0.24
CCDC43-204ENST00000588687 RHBDL2Q9NX52 303 aa13.58□□□□□ -0.24
CCDC43-204ENST00000588687 DAPK2Q9UIK4 370 aa13.58□□□□□ -0.24
CCDC43-204ENST00000588687 KLK5Q9Y337 293 aaPredicted RBP13.58□□□□□ -0.24
CCDC43-204ENST00000588687 HPRT1P00492 218 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 RPA2P15927 270 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 FCGR2BP31994 310 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-204ENST00000588687 SFXN4Q6P4A7 337 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 ZNF818PQ6ZRF7 136 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 HOGA1Q86XE5 327 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 STPG3Q8N7X2 389 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 PHLDA1Q8WV24 401 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-204ENST00000588687 BSCL2Q96G97 398 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-204ENST00000588687 ATP6V0BQ99437 205 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 AIFM2Q9BRQ8 373 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 COMMD5Q9GZQ3 224 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 MAP6D1Q9H9H5 199 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 THYN1Q9P016 225 aa13.57□□□□□ -0.24
CCDC43-204ENST00000588687 NDUFA4O00483 81 aa13.56□□□□□ -0.24
CCDC43-204ENST00000588687 SERPINE2P07093 398 aa13.56□□□□□ -0.24
CCDC43-204ENST00000588687 ARPC4P59998 168 aa13.56□□□□□ -0.24
CCDC43-204ENST00000588687 UBE2UQ5VVX9 321 aa13.56□□□□□ -0.24
CCDC43-204ENST00000588687 LGALS9CQ6DKI2 356 aa13.56□□□□□ -0.24
CCDC43-204ENST00000588687 THOC7Q6I9Y2 204 aaKnown RBP13.56□□□□□ -0.24
CCDC43-204ENST00000588687 PLEKHA2Q9HB19 425 aa13.56□□□□□ -0.24
CCDC43-204ENST00000588687 IGHV3OR16-8A0A075B7F1 116 aa13.55□□□□□ -0.24
CCDC43-204ENST00000588687 K7EIM0 57 aa13.55□□□□□ -0.24
CCDC43-204ENST00000588687 RPL35AP18077 110 aaKnown RBP13.55□□□□□ -0.24
CCDC43-204ENST00000588687 CATR1Q13166 79 aa13.55□□□□□ -0.24
CCDC43-204ENST00000588687 TPRA1Q86W33 373 aa13.55□□□□□ -0.24
CCDC43-204ENST00000588687 OR5H6Q8NGV6 325 aa13.55□□□□□ -0.24
CCDC43-204ENST00000588687 GALNT14Q96FL9 552 aa13.55□□□□□ -0.24
CCDC43-204ENST00000588687 CNBD2Q96M20 576 aa13.55□□□□□ -0.24
CCDC43-204ENST00000588687 SLC5A7Q9GZV3 580 aa13.55□□□□□ -0.24
CCDC43-204ENST00000588687 COMMD9Q9P000 198 aa13.55□□□□□ -0.24
CCDC43-204ENST00000588687 BLOC1S6Q9UL45 172 aa13.55□□□□□ -0.24
CCDC43-204ENST00000588687 F11RQ9Y624 299 aaKnown RBP13.55□□□□□ -0.24
CCDC43-204ENST00000588687 DNAH17Q9UFH2 4485 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 TEX50A0A1B0GTY4 177 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 OR4C46A6NHA9 309 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 K7EMT4 169 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 OR13C7P0DN81 318 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 ZNF124Q15973 351 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 SPSB3Q6PJ21 355 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 TMEM217Q8N7C4 229 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 OR51H1Q8NH63 302 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 SCARB1Q8WTV0 552 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 NDUFA4L2Q9NRX3 87 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 C21orf62Q9NYP8 219 aa13.54□□□□□ -0.24
CCDC43-204ENST00000588687 RRP15Q9Y3B9 282 aaKnown RBP13.54□□□□□ -0.24
CCDC43-204ENST00000588687 IGHV3-21A0A0B4J1V1 117 aa13.53□□□□□ -0.24
CCDC43-204ENST00000588687 CTSDP07339 412 aaPredicted RBP13.53□□□□□ -0.24
CCDC43-204ENST00000588687 TRAPPC2P0DI81 140 aa13.53□□□□□ -0.24
CCDC43-204ENST00000588687 TRAPPC2BP0DI82 140 aa13.53□□□□□ -0.24
CCDC43-204ENST00000588687 SCAND1P57086 179 aa13.53□□□□□ -0.24
CCDC43-204ENST00000588687 FXYD4P59646 89 aa13.53□□□□□ -0.24
CCDC43-204ENST00000588687 GABARAPL2P60520 117 aa13.53□□□□□ -0.24
CCDC43-204ENST00000588687 LAMTOR1Q6IAA8 161 aa13.53□□□□□ -0.24
CCDC43-204ENST00000588687 IZUMO2Q6UXV1 221 aa13.53□□□□□ -0.24
CCDC43-204ENST00000588687 HSD17B13Q7Z5P4 300 aaPredicted RBP13.53□□□□□ -0.24
CCDC43-204ENST00000588687 APRG1Q8IVJ8 170 aa13.53□□□□□ -0.24
CCDC43-204ENST00000588687 GIMAP1Q8WWP7 306 aa13.53□□□□□ -0.24
CCDC43-204ENST00000588687 TRAV18A0A075B6X5 111 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 MARCH11A6NNE9 402 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 C15orf62A8K5M9 175 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 ZNF207O43670 478 aaKnown RBP13.52□□□□□ -0.25
CCDC43-204ENST00000588687 CLEC2LP0C7M8 214 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 GNRHRP30968 328 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 PRR20EP86478 221 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 PRR20CP86479 221 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 PRR20DP86480 221 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 PRR20BP86481 221 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 PRR20AP86496 221 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 TMEM17Q86X19 198 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 DMBX1Q8NFW5 382 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 OR5B3Q8NH48 314 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 CD300LFQ8TDQ1 290 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 LSM10Q969L4 123 aaKnown RBP13.52□□□□□ -0.25
CCDC43-204ENST00000588687 RNF2Q99496 336 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 C20orf24Q9BUV8 137 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 C11orf68Q9H3H3 251 aaKnown RBP13.52□□□□□ -0.25
CCDC43-204ENST00000588687 ETV7Q9Y603 341 aa13.52□□□□□ -0.25
CCDC43-204ENST00000588687 DYNC1H1Q14204 4646 aaKnown RBP13.52□□□□□ -0.25
CCDC43-204ENST00000588687 FCER2P06734 321 aa13.51□□□□□ -0.25
CCDC43-204ENST00000588687 CTSGP08311 255 aa13.51□□□□□ -0.25
CCDC43-204ENST00000588687 SDC2P34741 201 aa13.51□□□□□ -0.25
CCDC43-204ENST00000588687 SLC25A24Q6NUK1 477 aa13.51□□□□□ -0.25
CCDC43-204ENST00000588687 SPARTQ8N0X7 666 aa13.51□□□□□ -0.25
CCDC43-204ENST00000588687 CADM3Q8N126 398 aa13.51□□□□□ -0.25
CCDC43-204ENST00000588687 OR1L8Q8NGR8 309 aa13.51□□□□□ -0.25
CCDC43-204ENST00000588687 OR10C1Q96KK4 312 aa13.51□□□□□ -0.25
CCDC43-204ENST00000588687 AUNIPQ9H7T9 357 aa13.51□□□□□ -0.25
CCDC43-204ENST00000588687 SMPXQ9UHP9 88 aa13.51□□□□□ -0.25
CCDC43-204ENST00000588687 A0A0A6YYH2 397 aa13.5□□□□□ -0.25
CCDC43-204ENST00000588687 A6NJ64 397 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms