RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 PLXNB1O43157 2135 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 RNF222A6NCQ9 220 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 NDUFA3O95167 84 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 CNTFRP26992 372 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 POLR2GP62487 172 aaKnown RBP eCLIP15.94■□□□□ 0.14
ATG4D-208ENST00000588667 TMUB2Q71RG4 321 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 KCNRGQ8N5I3 272 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 OSR1Q8TAX0 266 aaPredicted RBP15.94■□□□□ 0.14
ATG4D-208ENST00000588667 RHOVQ96L33 236 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 GON7Q9BXV9 100 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 ARL6Q9H0F7 186 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 RCL1Q9Y2P8 373 aaKnown RBP15.94■□□□□ 0.14
ATG4D-208ENST00000588667 TSC22D2O75157 780 aa15.93■□□□□ 0.14
ATG4D-208ENST00000588667 IGHG2P01859 326 aa15.93■□□□□ 0.14
ATG4D-208ENST00000588667 OPCMLQ14982 345 aa15.93■□□□□ 0.14
ATG4D-208ENST00000588667 POU2AF1Q16633 256 aa15.93■□□□□ 0.14
ATG4D-208ENST00000588667 FLYWCH2Q96CP2 140 aaKnown RBP15.93■□□□□ 0.14
ATG4D-208ENST00000588667 AQP10Q96PS8 301 aa15.93■□□□□ 0.14
ATG4D-208ENST00000588667 WNT10AQ9GZT5 417 aa15.93■□□□□ 0.14
ATG4D-208ENST00000588667 CACFD1Q9UGQ2 172 aa15.93■□□□□ 0.14
ATG4D-208ENST00000588667 SSSCA1O60232 199 aa15.92■□□□□ 0.14
ATG4D-208ENST00000588667 RBMXL2O75526 392 aaKnown RBP15.92■□□□□ 0.14
ATG4D-208ENST00000588667 P2RY1P47900 373 aa15.92■□□□□ 0.14
ATG4D-208ENST00000588667 VAMP2P63027 116 aa15.92■□□□□ 0.14
ATG4D-208ENST00000588667 C5orf64Q2M2E5 130 aa15.92■□□□□ 0.14
ATG4D-208ENST00000588667 TMEM177Q53S58 311 aa15.92■□□□□ 0.14
ATG4D-208ENST00000588667 SSX9Q7RTT3 188 aa15.92■□□□□ 0.14
ATG4D-208ENST00000588667 TSNAXQ99598 290 aaKnown RBP15.92■□□□□ 0.14
ATG4D-208ENST00000588667 MAGT1Q9H0U3 335 aa15.92■□□□□ 0.14
ATG4D-208ENST00000588667 TMEM140Q9NV12 185 aa15.92■□□□□ 0.14
ATG4D-208ENST00000588667 RRHO14718 337 aa15.91■□□□□ 0.14
ATG4D-208ENST00000588667 SHOXO15266 292 aa15.91■□□□□ 0.14
ATG4D-208ENST00000588667 NXPH3O95157 252 aa15.91■□□□□ 0.14
ATG4D-208ENST00000588667 SPDEFO95238 335 aa15.91■□□□□ 0.14
ATG4D-208ENST00000588667 KRTAP10-3P60369 221 aa15.91■□□□□ 0.14
ATG4D-208ENST00000588667 RPS16P62249 146 aaKnown RBP15.91■□□□□ 0.14
ATG4D-208ENST00000588667 SLC35E3Q7Z769 313 aa15.91■□□□□ 0.14
ATG4D-208ENST00000588667 VKORC1L1Q8N0U8 176 aa15.91■□□□□ 0.14
ATG4D-208ENST00000588667 OR4A16Q8NH70 328 aa15.91■□□□□ 0.14
ATG4D-208ENST00000588667 CITED1Q99966 193 aa15.91■□□□□ 0.14
ATG4D-208ENST00000588667 SLA2Q9H6Q3 261 aa15.91■□□□□ 0.14
ATG4D-208ENST00000588667 KANTRA0A1W2PQU2 76 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 KCNAB3O43448 404 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 MED6O75586 246 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 HARBI1Q96MB7 349 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 RAB40CQ96S21 281 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 ZC4H2Q9NQZ6 224 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 HSPB7Q9UBY9 170 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 SYNGR2O43760 224 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 HLA-DRB1P01911 266 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 RPL12P30050 165 aaKnown RBP15.9■□□□□ 0.14
ATG4D-208ENST00000588667 LGALS7P47929 136 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 TNFRSF9Q07011 255 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 OR4A47Q6IF82 309 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 WIPF2Q8TF74 440 aaPredicted RBP15.9■□□□□ 0.14
ATG4D-208ENST00000588667 FBXL15Q9H469 300 aa15.9■□□□□ 0.14
ATG4D-208ENST00000588667 TNCP24821 2201 aa15.89■□□□□ 0.13
ATG4D-208ENST00000588667 OR9G9P0C7N8 305 aa15.89■□□□□ 0.13
ATG4D-208ENST00000588667 PLGLAQ15195 96 aa15.89■□□□□ 0.13
ATG4D-208ENST00000588667 PSG5Q15238 335 aa15.89■□□□□ 0.13
ATG4D-208ENST00000588667 AARDQ4LEZ3 155 aa15.89■□□□□ 0.13
ATG4D-208ENST00000588667 HSPB9Q9BQS6 159 aa15.89■□□□□ 0.13
ATG4D-208ENST00000588667 C11orf1Q9H5F2 150 aa15.89■□□□□ 0.13
ATG4D-208ENST00000588667 MSGN1A6NI15 193 aa15.88■□□□□ 0.13
ATG4D-208ENST00000588667 AP4M1O00189 453 aa15.88■□□□□ 0.13
ATG4D-208ENST00000588667 BCL2L11O43521 198 aa15.88■□□□□ 0.13
ATG4D-208ENST00000588667 UBE2KP61086 200 aa15.88■□□□□ 0.13
ATG4D-208ENST00000588667 IFITM2Q01629 132 aa15.88■□□□□ 0.13
ATG4D-208ENST00000588667 OR2C3Q8N628 320 aa15.88■□□□□ 0.13
ATG4D-208ENST00000588667 BET1LQ9NYM9 111 aa15.88■□□□□ 0.13
ATG4D-208ENST00000588667 METTL1Q9UBP6 276 aaKnown RBP15.88■□□□□ 0.13
ATG4D-208ENST00000588667 WSB1Q9Y6I7 421 aa15.88■□□□□ 0.13
ATG4D-208ENST00000588667 TET2Q6N021 2002 aaPredicted RBP15.88■□□□□ 0.13
ATG4D-208ENST00000588667 IGLV2-23P01705 113 aa15.87■□□□□ 0.13
ATG4D-208ENST00000588667 CAV2P51636 162 aa15.87■□□□□ 0.13
ATG4D-208ENST00000588667 RPL23AP62750 156 aaKnown RBP15.87■□□□□ 0.13
ATG4D-208ENST00000588667 ZNF429Q86V71 674 aa15.87■□□□□ 0.13
ATG4D-208ENST00000588667 VSTM2AQ8TAG5 236 aa15.87■□□□□ 0.13
ATG4D-208ENST00000588667 ARPC5LQ9BPX5 153 aa15.87■□□□□ 0.13
ATG4D-208ENST00000588667 LYRM2Q9NU23 88 aaPredicted RBP15.87■□□□□ 0.13
ATG4D-208ENST00000588667 LINC01548A6NM66 108 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 SRRM4A7MD48 611 aaKnown RBP15.86■□□□□ 0.13
ATG4D-208ENST00000588667 SLC25A17O43808 307 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 TAS2R30P59541 319 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 OR2B8PP59922 312 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 CENPVQ7Z7K6 275 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-208ENST00000588667 OR52E5Q8NH55 327 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 NOL4LQ96MY1 436 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-208ENST00000588667 QTRT1Q9BXR0 403 aaKnown RBP15.86■□□□□ 0.13
ATG4D-208ENST00000588667 SLC25A31Q9H0C2 315 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 RBKSQ9H477 322 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 PRNDQ9UKY0 176 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 WNK1Q9H4A3 2382 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 IGHV7-81A0A0B4J1V7 117 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 C15orf61A6NNL5 157 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 LY86O95711 162 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 IFNA17P01571 189 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 IL6RP08887 468 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-208ENST00000588667 SAA1P0DJI8 122 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-208ENST00000588667 SPCS3P61009 180 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms