RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 PSMB8P28062 276 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 CCR6P51684 374 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 DHODHQ02127 395 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 C10orf55Q5SWW7 151 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 H2BFWTQ7Z2G1 175 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 TMED4Q7Z7H5 227 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 OR5M8Q8NGP6 311 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 TMEM230Q96A57 120 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 SEC22AQ96IW7 307 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 TSC22D3Q99576 134 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 SEC14L6B5MCN3 397 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 LYRM1O43325 122 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 FGF2P09038 288 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 APELAP0DMC3 54 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 ANXA3P12429 323 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 LYL1P12980 280 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 OR5T1Q8NG75 326 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 GLYATL2Q8WU03 294 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 FYTTD1Q96QD9 318 aaKnown RBP12.12□□□□□ -0.47
NCLN-203ENST00000587740 COMMD5Q9GZQ3 224 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 TMEM222Q9H0R3 208 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 ZNF355PQ9NSJ1 428 aa12.12□□□□□ -0.47
NCLN-203ENST00000587740 ZNF256Q9Y2P7 627 aaPredicted RBP12.12□□□□□ -0.47
NCLN-203ENST00000587740 PLA2G10O15496 165 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 SOX15O60248 233 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 NDUFB6O95139 128 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 CDS2O95674 445 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 OR9G9P0C7N8 305 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 RAB9AP51151 201 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 AKR1C2P52895 323 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 TMEM128Q5BJH2 165 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 ASPHD1Q5U4P2 390 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 CENPSQ8N2Z9 138 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 OR4A16Q8NH70 328 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 RNASE11Q8TAA1 199 aaKnown RBP12.11□□□□□ -0.47
NCLN-203ENST00000587740 GALNT14Q96FL9 552 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 FKBP11Q9NYL4 201 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 PRNDQ9UKY0 176 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 NSG2Q9Y328 171 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 SMAD5-AS1Q9Y6J3 95 aa12.11□□□□□ -0.47
NCLN-203ENST00000587740 HYDINQ4G0P3 5121 aa12.1□□□□□ -0.47
NCLN-203ENST00000587740 MYOD1P15172 320 aa12.1□□□□□ -0.47
NCLN-203ENST00000587740 BTCP35070 178 aa12.1□□□□□ -0.47
NCLN-203ENST00000587740 CDX1P47902 265 aaPredicted RBP12.1□□□□□ -0.47
NCLN-203ENST00000587740 SLC25A42Q86VD7 318 aa12.1□□□□□ -0.47
NCLN-203ENST00000587740 RBPMSQ93062 196 aaKnown RBP12.1□□□□□ -0.47
NCLN-203ENST00000587740 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
NCLN-203ENST00000587740 MS4A10Q96PG2 267 aa12.1□□□□□ -0.47
NCLN-203ENST00000587740 KLK15Q9H2R5 256 aa12.1□□□□□ -0.47
NCLN-203ENST00000587740 SLA2Q9H6Q3 261 aa12.1□□□□□ -0.47
NCLN-203ENST00000587740 COA4Q9NYJ1 87 aa12.1□□□□□ -0.47
NCLN-203ENST00000587740 OR51B2Q9Y5P1 312 aa12.1□□□□□ -0.47
NCLN-203ENST00000587740 HMX3A6NHT5 357 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 TEX22C9J3V5 150 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 E7EUB6 86 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 H3BUA1 57 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 RBMXL2O75526 392 aaKnown RBP12.09□□□□□ -0.47
NCLN-203ENST00000587740 UPK1BO75841 260 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 IGKV1-5P01602 117 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 OR2B8PP59922 312 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 SUPT4H1P63272 117 aaKnown RBP12.09□□□□□ -0.47
NCLN-203ENST00000587740 TMEM187Q14656 261 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 ZFAND6Q6FIF0 208 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 THOC7Q6I9Y2 204 aaKnown RBP12.09□□□□□ -0.47
NCLN-203ENST00000587740 SELENOHQ8IZQ5 122 aaKnown RBP12.09□□□□□ -0.47
NCLN-203ENST00000587740 OR1L8Q8NGR8 309 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 CASTOR1Q8WTX7 329 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 QTRT1Q9BXR0 403 aaKnown RBP12.09□□□□□ -0.47
NCLN-203ENST00000587740 KRTAP17-1Q9BYP8 105 aa12.09□□□□□ -0.47
NCLN-203ENST00000587740 TEX50A0A1B0GTY4 177 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 C15orf61A6NNL5 157 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 TRGV3P03979 118 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 TRAPPC2P0DI81 140 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 TRAPPC2BP0DI82 140 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 VAMP1P23763 118 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 TPPP2P59282 170 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 UBE2MP61081 183 aaKnown RBP12.08□□□□□ -0.48
NCLN-203ENST00000587740 FHL3Q13643 280 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 TMEM268Q5VZI3 342 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 MZT2BQ6NZ67 158 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 TTC9CQ8N5M4 171 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 ZNF491Q8N8L2 437 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 LHFPL5Q8TAF8 219 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 MYOZ3Q8TDC0 251 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 IL22RA2Q969J5 263 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 UBE2E2Q96LR5 201 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 TMEM56Q96MV1 263 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 FLVCR2Q9UPI3 526 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 TMEM56-RWDD3S4R434 201 aa12.08□□□□□ -0.48
NCLN-203ENST00000587740 PIGBOS1A0A0B4J2F0 54 aa12.07□□□□□ -0.48
NCLN-203ENST00000587740 A0A1B0GW64 132 aa12.07□□□□□ -0.48
NCLN-203ENST00000587740 CGB1A6NKQ9 187 aa12.07□□□□□ -0.48
NCLN-203ENST00000587740 NPIPB5A8MRT5 1133 aa12.07□□□□□ -0.48
NCLN-203ENST00000587740 LY86O95711 162 aa12.07□□□□□ -0.48
NCLN-203ENST00000587740 SRPXP78539 464 aa12.07□□□□□ -0.48
NCLN-203ENST00000587740 FAM219AQ8IW50 185 aa12.07□□□□□ -0.48
NCLN-203ENST00000587740 LGI3Q8N145 548 aa12.07□□□□□ -0.48
NCLN-203ENST00000587740 OR5B3Q8NH48 314 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms