RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 WFDC3Q8IUB2 231 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 CD300LFQ8TDQ1 290 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 VN1R17PQ8TDU5 208 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 RNF167Q9H6Y7 350 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 AUNIPQ9H7T9 357 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 COMMD9Q9P000 198 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 TP53TG1Q9Y2A0 90 aa14.4□□□□□ -0.1
TRAF4-216ENST00000586813 A0A0J9YWU9 116 aa14.39□□□□□ -0.11
TRAF4-216ENST00000586813 CXorf65A6NEN9 183 aa14.39□□□□□ -0.11
TRAF4-216ENST00000586813 CYB5BO43169 146 aa14.39□□□□□ -0.11
TRAF4-216ENST00000586813 SLC38A6Q8IZM9 456 aa14.39□□□□□ -0.11
TRAF4-216ENST00000586813 OR5AP2Q8NGF4 316 aa14.39□□□□□ -0.11
TRAF4-216ENST00000586813 GIMAP1Q8WWP7 306 aa14.39□□□□□ -0.11
TRAF4-216ENST00000586813 DAZ1Q9NQZ3 744 aaKnown RBP14.39□□□□□ -0.11
TRAF4-216ENST00000586813 UBQLN2Q9UHD9 624 aa14.39□□□□□ -0.11
TRAF4-216ENST00000586813 NUPR2A6NF83 97 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 OR2T8A6NH00 312 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 TSPAN4O14817 238 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 SERPINE2P07093 398 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 OR13C7P0DN81 318 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 RPA2P15927 270 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 BMI1P35226 326 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 EWSR1Q01844 656 aaKnown RBP eCLIP14.38□□□□□ -0.112e-6■■■■□ 23.3
TRAF4-216ENST00000586813 WT1-ASQ06250 92 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 DEFB135Q30KP9 77 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 Q6ZWC4 215 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 HSD17B13Q7Z5P4 300 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-216ENST00000586813 LYG2Q86SG7 212 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 BSCL2Q96G97 398 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-216ENST00000586813 DIABLOQ9NR28 239 aa14.38□□□□□ -0.11
TRAF4-216ENST00000586813 FRAS1Q86XX4 4008 aa14.37□□□□□ -0.11
TRAF4-216ENST00000586813 LOC100506127A0A0U1RQW1 187 aa14.37□□□□□ -0.11
TRAF4-216ENST00000586813 SPRY2O43597 315 aa14.37□□□□□ -0.11
TRAF4-216ENST00000586813 LY6G6CO95867 125 aa14.37□□□□□ -0.11
TRAF4-216ENST00000586813 TRAPPC2P0DI81 140 aa14.37□□□□□ -0.11
TRAF4-216ENST00000586813 TRAPPC2BP0DI82 140 aa14.37□□□□□ -0.11
TRAF4-216ENST00000586813 CBX5P45973 191 aa14.37□□□□□ -0.11
TRAF4-216ENST00000586813 HERV-K104P61576 105 aa14.37□□□□□ -0.11
TRAF4-216ENST00000586813 TNFRSF9Q07011 255 aa14.37□□□□□ -0.11
TRAF4-216ENST00000586813 BORCS5Q969J3 196 aa14.37□□□□□ -0.11
TRAF4-216ENST00000586813 TEX50A0A1B0GTY4 177 aa14.36□□□□□ -0.11
TRAF4-216ENST00000586813 MEIS3P1A6NDR6 274 aa14.36□□□□□ -0.11
TRAF4-216ENST00000586813 MARCH11A6NNE9 402 aa14.36□□□□□ -0.11
TRAF4-216ENST00000586813 GNRHRP30968 328 aa14.36□□□□□ -0.11
TRAF4-216ENST00000586813 MFAP2P55001 183 aa14.36□□□□□ -0.11
TRAF4-216ENST00000586813 ERVK-16P61578 105 aa14.36□□□□□ -0.11
TRAF4-216ENST00000586813 ODF3L2Q3SX64 289 aa14.36□□□□□ -0.11
TRAF4-216ENST00000586813 SLC25A24Q6NUK1 477 aa14.36□□□□□ -0.11
TRAF4-216ENST00000586813 SPSB3Q6PJ21 355 aa14.36□□□□□ -0.11
TRAF4-216ENST00000586813 OR1L8Q8NGR8 309 aa14.36□□□□□ -0.11
TRAF4-216ENST00000586813 UBE2CO00762 179 aa14.35□□□□□ -0.11
TRAF4-216ENST00000586813 RLN1P04808 185 aa14.35□□□□□ -0.11
TRAF4-216ENST00000586813 LAMTOR1Q6IAA8 161 aa14.35□□□□□ -0.11
TRAF4-216ENST00000586813 LSM10Q969L4 123 aaKnown RBP14.35□□□□□ -0.11
TRAF4-216ENST00000586813 ATP6V0BQ99437 205 aa14.35□□□□□ -0.11
TRAF4-216ENST00000586813 CHRDL1Q9BU40 450 aa14.35□□□□□ -0.11
TRAF4-216ENST00000586813 IFT46Q9NQC8 304 aa14.35□□□□□ -0.11
TRAF4-216ENST00000586813 NDUFA4L2Q9NRX3 87 aa14.35□□□□□ -0.11
TRAF4-216ENST00000586813 C21orf62Q9NYP8 219 aa14.35□□□□□ -0.11
TRAF4-216ENST00000586813 EHFQ9NZC4 300 aa14.35□□□□□ -0.11
TRAF4-216ENST00000586813 F11RQ9Y624 299 aaKnown RBP14.35□□□□□ -0.11
TRAF4-216ENST00000586813 IGHV3-21A0A0B4J1V1 117 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 KIR2DL5BA0A0G2JN68 375 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 KIR2DL5BA0A0G2JPC4 375 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 F8W735 103 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-216ENST00000586813 NDUFA4O00483 81 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 F2RP25116 425 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 CEMP1Q6PRD7 247 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-216ENST00000586813 KIR2DL5AQ8N109 375 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 KIR2DL5BQ8NHK3 375 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 SCARB1Q8WTV0 552 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 C20orf24Q9BUV8 137 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 HINT2Q9BX68 163 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 YTHDF1Q9BYJ9 559 aaKnown RBP14.34□□□□□ -0.11
TRAF4-216ENST00000586813 Q9H521 79 aa14.34□□□□□ -0.11
TRAF4-216ENST00000586813 IGHV3OR16-8A0A075B7F1 116 aa14.33□□□□□ -0.12
TRAF4-216ENST00000586813 OR4C46A6NHA9 309 aa14.33□□□□□ -0.12
TRAF4-216ENST00000586813 PGLYRP1O75594 196 aaPredicted RBP14.33□□□□□ -0.12
TRAF4-216ENST00000586813 ATF4P18848 351 aaPredicted RBP14.33□□□□□ -0.12
TRAF4-216ENST00000586813 ADMP35318 185 aa14.33□□□□□ -0.12
TRAF4-216ENST00000586813 STPG3Q8N7X2 389 aa14.33□□□□□ -0.12
TRAF4-216ENST00000586813 UBAC2Q8NBM4 344 aa14.33□□□□□ -0.12
TRAF4-216ENST00000586813 FCAMRQ8WWV6 532 aa14.33□□□□□ -0.12
TRAF4-216ENST00000586813 MOB3AQ96BX8 217 aa14.33□□□□□ -0.12
TRAF4-216ENST00000586813 NSG2Q9Y328 171 aa14.33□□□□□ -0.12
TRAF4-216ENST00000586813 OR51B2Q9Y5P1 312 aa14.33□□□□□ -0.12
TRAF4-216ENST00000586813 KMT2AQ03164 3969 aa14.32□□□□□ -0.12
TRAF4-216ENST00000586813 K7EIM0 57 aa14.32□□□□□ -0.12
TRAF4-216ENST00000586813 K7EMT4 169 aa14.32□□□□□ -0.12
TRAF4-216ENST00000586813 XRCC3O43542 346 aa14.32□□□□□ -0.12
TRAF4-216ENST00000586813 ZNF207O43670 478 aaKnown RBP14.32□□□□□ -0.12
TRAF4-216ENST00000586813 KRASP01116 189 aa14.32□□□□□ -0.12
TRAF4-216ENST00000586813 RFX2P48378 723 aa14.32□□□□□ -0.12
TRAF4-216ENST00000586813 DHRS11Q6UWP2 260 aa14.32□□□□□ -0.12
TRAF4-216ENST00000586813 RNF183Q96D59 192 aa14.32□□□□□ -0.12
TRAF4-216ENST00000586813 DGCR14Q96DF8 476 aaKnown RBP14.32□□□□□ -0.12
TRAF4-216ENST00000586813 ZNF2Q9BSG1 426 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-216ENST00000586813 ANAPC10Q9UM13 185 aa14.32□□□□□ -0.12
TRAF4-216ENST00000586813 C15orf62A8K5M9 175 aa14.31□□□□□ -0.12
TRAF4-216ENST00000586813 TMEM127O75204 238 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms