RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 C10orf55Q5SWW7 151 aa18■□□□□ 0.47
LSM7-202ENST00000585395 TMEM268Q5VZI3 342 aa18■□□□□ 0.47
LSM7-202ENST00000585395 C18orf65Q6ZTR6 163 aa18■□□□□ 0.47
LSM7-202ENST00000585395 OR5T1Q8NG75 326 aa18■□□□□ 0.47
LSM7-202ENST00000585395 TMEM56Q96MV1 263 aa18■□□□□ 0.47
LSM7-202ENST00000585395 PDCD10Q9BUL8 212 aa18■□□□□ 0.47
LSM7-202ENST00000585395 CACFD1Q9UGQ2 172 aa18■□□□□ 0.47
LSM7-202ENST00000585395 TMEM56-RWDD3S4R434 201 aa18■□□□□ 0.47
LSM7-202ENST00000585395 TRAV3A0A0B4J244 114 aa17.99■□□□□ 0.47
LSM7-202ENST00000585395 C15orf61A6NNL5 157 aa17.99■□□□□ 0.47
LSM7-202ENST00000585395 IGLL1P15814 213 aa17.99■□□□□ 0.47
LSM7-202ENST00000585395 OR2B8PP59922 312 aa17.99■□□□□ 0.47
LSM7-202ENST00000585395 ASAH1Q13510 395 aa17.99■□□□□ 0.47
LSM7-202ENST00000585395 TTC9CQ8N5M4 171 aa17.99■□□□□ 0.47
LSM7-202ENST00000585395 UBE2E2Q96LR5 201 aa17.99■□□□□ 0.47
LSM7-202ENST00000585395 ZNF257Q9Y2Q1 563 aa17.99■□□□□ 0.47
LSM7-202ENST00000585395 A0A0G2JLM5 398 aa17.98■□□□□ 0.47
LSM7-202ENST00000585395 FAM240BA0A1B0GVZ2 78 aa17.98■□□□□ 0.47
LSM7-202ENST00000585395 TRGV3P03979 118 aa17.98■□□□□ 0.47
LSM7-202ENST00000585395 TPPP2P59282 170 aa17.98■□□□□ 0.47
LSM7-202ENST00000585395 TMEM187Q14656 261 aa17.98■□□□□ 0.47
LSM7-202ENST00000585395 SELENOHQ8IZQ5 122 aaKnown RBP17.98■□□□□ 0.47
LSM7-202ENST00000585395 LSM10Q969L4 123 aaKnown RBP17.98■□□□□ 0.47
LSM7-202ENST00000585395 RCC1LQ96I51 464 aaKnown RBP17.98■□□□□ 0.47
LSM7-202ENST00000585395 DUXBA0A1W2PPF3 345 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 NPIPB5A8MRT5 1133 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 SFT2D2O95562 160 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 IGKV1-5P01602 117 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 BTCP35070 178 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 MYCNOSP40205 109 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 ASPHD1Q5U4P2 390 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 HINT2Q9BX68 163 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 TMEM14BQ9NUH8 114 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 NSG2Q9Y328 171 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 NOTCH3Q9UM47 2321 aa17.97■□□□□ 0.47
LSM7-202ENST00000585395 COL7A1Q02388 2944 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 A0A0B4J2A0 478 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 TEX50A0A1B0GTY4 177 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 TEX22C9J3V5 150 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 SOX15O60248 233 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 APELAP0DMC3 54 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 MECP2P51608 486 aaKnown RBP17.96■□□□□ 0.47
LSM7-202ENST00000585395 SUPT4H1P63272 117 aaKnown RBP17.96■□□□□ 0.47
LSM7-202ENST00000585395 ZNF429Q86V71 674 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 WFDC9Q8NEX5 89 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 ENKURQ8TC29 256 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 MYOZ3Q8TDC0 251 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 DPF1Q92782 380 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 MS4A10Q96PG2 267 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 GPR61Q9BZJ8 451 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 SHPKQ9UHJ6 478 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 TNCP24821 2201 aa17.96■□□□□ 0.47
LSM7-202ENST00000585395 C13orf42A0A1B0GVH6 325 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 HMX3A6NHT5 357 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 DUS4LO95620 317 aaKnown RBP17.95■□□□□ 0.46
LSM7-202ENST00000585395 TCRBP04435 133 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 DEFA4P12838 97 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 HIST1H1BP16401 226 aaKnown RBP17.95■□□□□ 0.46
LSM7-202ENST00000585395 PSMB6P28072 239 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 HSPE1P61604 102 aaKnown RBP17.95■□□□□ 0.46
LSM7-202ENST00000585395 LINC00482Q8N8I6 264 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 ZNF491Q8N8L2 437 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 C4orf3Q8WVX3 66 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 USMG5Q96IX5 58 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 DUX3Q96PT4 197 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 C20orf85Q9H1P6 137 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 KLK15Q9H2R5 256 aa17.95■□□□□ 0.46
LSM7-202ENST00000585395 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.95■□□□□ 0.46
LSM7-202ENST00000585395 CCL24O00175 119 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 HLA-AP01891 365 aaKnown RBP17.94■□□□□ 0.46
LSM7-202ENST00000585395 P0C879 139 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 PPP1R1AQ13522 171 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 DEFB136Q30KP8 78 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 C4orf46Q504U0 113 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 ETV3LQ6ZN32 361 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 SLC35G3Q8N808 338 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 COQ8AQ8NI60 647 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 LHFPL5Q8TAF8 219 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 CASTOR1Q8WTX7 329 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 NDUFA4L2Q9NRX3 87 aa17.94■□□□□ 0.46
LSM7-202ENST00000585395 FAM223BA6NKX1 122 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 IFNA17P01571 189 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 CRYGCP07315 174 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 MYOD1P15172 320 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 FAM209BQ5JX69 171 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 FAM223AQ8IWN6 122 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 LRTM2Q8N967 370 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 OR1L6Q8NGR2 347 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 MCRIP2Q9BUT9 160 aaKnown RBP17.93■□□□□ 0.46
LSM7-202ENST00000585395 ALX4Q9H161 411 aaPredicted RBP17.93■□□□□ 0.46
LSM7-202ENST00000585395 PLEKHA3Q9HB20 300 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 ENY2Q9NPA8 101 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 THYN1Q9P016 225 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 TBC1D24Q9ULP9 559 aa17.93■□□□□ 0.46
LSM7-202ENST00000585395 OR4E1P0C645 316 aa17.92■□□□□ 0.46
LSM7-202ENST00000585395 CTRB1P17538 263 aa17.92■□□□□ 0.46
LSM7-202ENST00000585395 PRCDQ00LT1 54 aa17.92■□□□□ 0.46
LSM7-202ENST00000585395 CTRB2Q6GPI1 263 aa17.92■□□□□ 0.46
LSM7-202ENST00000585395 LYG2Q86SG7 212 aa17.92■□□□□ 0.46
LSM7-202ENST00000585395 NECAP1Q8NC96 275 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms