RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TFPI2P48307 235 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 MEOX2P50222 304 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 INSL3P51460 131 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 UBE2E1P51965 193 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 POLR2GP62487 172 aaKnown RBP eCLIP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 EMX1Q04741 257 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 CDK5R1Q15078 307 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 IDNKQ5T6J7 187 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF773Q6PK81 442 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 NKAIN4Q8IVV8 208 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SELENOHQ8IZQ5 122 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 GAPTQ8N292 157 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 PNKDQ8N490 385 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 CD177Q8N6Q3 437 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 YIPF7Q8N8F6 280 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF565Q8N9K5 539 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 LY6G5BQ8NDX9 201 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR51A4Q8NGJ6 313 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 KLF14Q8TD94 323 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 CYGBQ8WWM9 190 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 CEP19Q96LK0 163 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TSNAXQ99598 290 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 VGLL1Q99990 258 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 PBOV1Q9GZY1 135 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 DUSP21Q9H596 190 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 NOX3Q9HBY0 568 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SIRT7Q9NRC8 400 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 CTSZQ9UBR2 303 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 KCNE3Q9Y6H6 103 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 VPS13CQ709C8 3753 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 COL12A1Q99715 3063 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 LRRK2Q5S007 2527 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A0G2JMM0 328 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A1W2PPB8 328 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A1W2PRS3 328 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 PQLC2LA1A4F0 135 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 C5orf63A6NC05 138 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TVP23AA6NH52 213 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 KIR3DP1A8MWS1 328 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 LEUTXA8MZ59 168 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 MCRIP1C9JLW8 97 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 E7EQL1 145 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 RNASEK-C17orf49H0YIS7 233 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 CORTO00230 105 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SOCS3O14543 225 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 LHBP01229 141 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV2-5P01817 119 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 PGA5P0DJD9 388 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 LGALS7P47929 136 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF137PP52743 207 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TMBIM6P55061 237 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 DLX1P56177 255 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 GNB2P62879 340 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM267Q0VDI3 215 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF816Q0VGE8 651 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 FCN2Q15485 313 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 GRK1Q15835 563 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 KLK9Q2XQG4 91 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 LINC01590Q5TEZ4 76 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 APRG1Q8IVJ8 170 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 RDH10Q8IZV5 341 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF676Q8N7Q3 588 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR11H6Q8NGC7 330 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 CANT1Q8WVQ1 401 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 S100ZQ8WXG8 99 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 RORBQ92753 470 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SEH1LQ96EE3 360 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TSC22D3Q99576 134 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 IFT46Q9NQC8 304 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2S2Q9NQN1 319 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 COPZ2Q9P299 210 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 KLK9Q9UKQ9 250 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 INSIG2Q9Y5U4 225 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ACACAQ13085 2346 aa1.46□□□□□ -2.17
SMCHD1-211ENST00000584897 RP1P56715 2156 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 BOD1L1Q8NFC6 3051 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 IGHV3-16A0A0C4DH30 117 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 C5orf49A4QMS7 147 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 OR5H14A6NHG9 310 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 C17orf98A8MV24 154 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 J3QRE1 110 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 FABP7O15540 132 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 TPST1O60507 370 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 RP2O75695 350 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 SC5DO75845 299 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 UCHL1P09936 223 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 CCL2P13500 99 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 HIST1H1CP16403 213 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 AKR1C4P17516 323 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 SRP14P37108 136 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF83P51522 516 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 APOC4P55056 127 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 TAS2R31P59538 309 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 CATR1Q13166 79 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 NNATQ16517 81 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 ATAD3CQ5T2N8 411 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 UFSP1Q6NVU6 142 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF771Q7L3S4 317 aaPredicted RBP1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 DCXRQ7Z4W1 244 aa1.46□□□□□ -2.18
SMCHD1-211ENST00000584897 NECAP1Q8NC96 275 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms