RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 RAB3DO95716 219 aa13.59□□□□□ -0.23
ERBB2-221ENST00000584888 IGLV1-51P01701 117 aa13.59□□□□□ -0.23
ERBB2-221ENST00000584888 REG1AP05451 166 aa13.59□□□□□ -0.23
ERBB2-221ENST00000584888 FRMD6-AS1P0C7T7 363 aa13.59□□□□□ -0.23
ERBB2-221ENST00000584888 HIST1H1BP16401 226 aaKnown RBP13.59□□□□□ -0.23
ERBB2-221ENST00000584888 SYNJ2BPP57105 145 aa13.59□□□□□ -0.23
ERBB2-221ENST00000584888 FAM209BQ5JX69 171 aa13.59□□□□□ -0.23
ERBB2-221ENST00000584888 OR10W1Q8NGF6 305 aa13.59□□□□□ -0.23
ERBB2-221ENST00000584888 OR1L8Q8NGR8 309 aa13.59□□□□□ -0.23
ERBB2-221ENST00000584888 QTRT1Q9BXR0 403 aaKnown RBP13.59□□□□□ -0.23
ERBB2-221ENST00000584888 RBM38Q9H0Z9 239 aaKnown RBP13.59□□□□□ -0.23
ERBB2-221ENST00000584888 C3orf84H3BNL1 204 aa13.58□□□□□ -0.24
ERBB2-221ENST00000584888 GSTZ1O43708 216 aaPredicted RBP13.58□□□□□ -0.24
ERBB2-221ENST00000584888 NOL3O60936 208 aaKnown RBP13.58□□□□□ -0.24
ERBB2-221ENST00000584888 DHFRP00374 187 aa13.58□□□□□ -0.24
ERBB2-221ENST00000584888 TRAPPC2P0DI81 140 aa13.58□□□□□ -0.24
ERBB2-221ENST00000584888 TRAPPC2BP0DI82 140 aa13.58□□□□□ -0.24
ERBB2-221ENST00000584888 TNFSF8P32971 234 aa13.58□□□□□ -0.24
ERBB2-221ENST00000584888 THOC7Q6I9Y2 204 aaKnown RBP13.58□□□□□ -0.24
ERBB2-221ENST00000584888 OR9G4Q8NGQ1 327 aa13.58□□□□□ -0.24
ERBB2-221ENST00000584888 TMEM14BQ9NUH8 114 aa13.58□□□□□ -0.24
ERBB2-221ENST00000584888 SIGLEC8Q9NYZ4 499 aa13.58□□□□□ -0.24
ERBB2-221ENST00000584888 NSG2Q9Y328 171 aa13.58□□□□□ -0.24
ERBB2-221ENST00000584888 DBX1A6NMT0 343 aa13.57□□□□□ -0.24
ERBB2-221ENST00000584888 CSN3P07498 182 aa13.57□□□□□ -0.24
ERBB2-221ENST00000584888 PGAM2P15259 253 aa13.57□□□□□ -0.24
ERBB2-221ENST00000584888 PI3P19957 117 aa13.57□□□□□ -0.24
ERBB2-221ENST00000584888 MECP2P51608 486 aaKnown RBP13.57□□□□□ -0.24
ERBB2-221ENST00000584888 WT1-ASQ06250 92 aa13.57□□□□□ -0.24
ERBB2-221ENST00000584888 IL18Q14116 193 aa13.57□□□□□ -0.24
ERBB2-221ENST00000584888 RPEL1Q2QD12 228 aa13.57□□□□□ -0.24
ERBB2-221ENST00000584888 HAPLN4Q86UW8 402 aa13.57□□□□□ -0.24
ERBB2-221ENST00000584888 CCDC140Q96MF4 163 aa13.57□□□□□ -0.24
ERBB2-221ENST00000584888 RCHY1Q96PM5 261 aa13.57□□□□□ -0.24
ERBB2-221ENST00000584888 C6orf62Q9GZU0 229 aaPredicted RBP13.57□□□□□ -0.24
ERBB2-221ENST00000584888 SERPINE2P07093 398 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 P0C879 139 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 PIGPP57054 158 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 MEF2DQ14814 521 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 TATDN3Q17R31 274 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 HSD17B13Q7Z5P4 300 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-221ENST00000584888 OR13C8Q8NGS7 320 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 MCFD2Q8NI22 146 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 ZFAND1Q8TCF1 268 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 FKBP11Q9NYL4 201 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 RSL24D1Q9UHA3 163 aaKnown RBP13.56□□□□□ -0.24
ERBB2-221ENST00000584888 PRNDQ9UKY0 176 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 OR51B2Q9Y5P1 312 aa13.56□□□□□ -0.24
ERBB2-221ENST00000584888 ANKRD20A5PA0PJZ0 165 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 C15orf61A6NNL5 157 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 PPP5D1E7EU14 171 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 H0Y980 276 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 SNAPC5O75971 98 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 CTSDP07339 412 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-221ENST00000584888 OR13C7P0DN81 318 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 FAAP20Q6NZ36 180 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 ADAMTSL5Q6ZMM2 481 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 GDPD1Q8N9F7 314 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 OR4C16Q8NGL9 310 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 OR5B3Q8NH48 314 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 MARCH1Q8TCQ1 289 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 TP53RKQ96S44 253 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 TSC22D3Q99576 134 aa13.55□□□□□ -0.24
ERBB2-221ENST00000584888 MFSD2BA6NFX1 497 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 GGCTO75223 188 aaKnown RBP13.54□□□□□ -0.24
ERBB2-221ENST00000584888 AKAIN1P0CW23 69 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 DEFA4P12838 97 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 PPP5CP53041 499 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 MFAP2P55001 183 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 SCGB2B2Q4G0G5 96 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 GPHB5Q86YW7 130 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 Q8N1Y9 231 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 MUC7Q8TAX7 377 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 LSM10Q969L4 123 aaKnown RBP13.54□□□□□ -0.24
ERBB2-221ENST00000584888 EEF1AKMT3Q96AZ1 226 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 RTBDNQ9BSG5 229 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-221ENST00000584888 S4R3C0 116 aa13.54□□□□□ -0.24
ERBB2-221ENST00000584888 TRBV7-1A0A0A6YYK4 115 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 C3orf85A0A1B0GTC6 90 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 FABP12A6NFH5 140 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 ZNF701M0R085 212 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-221ENST00000584888 LGALS9O00182 355 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 IGKV1-5P01602 117 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 IGHV3-23P01764 117 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 SURF2Q15527 256 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-221ENST00000584888 CLEC19AQ6UXS0 136 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 H2BFWTQ7Z2G1 175 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 ZNF502Q8TBZ5 544 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 CXorf58Q96LI9 332 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 ZMAT4Q9H898 229 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 GPR132Q9UNW8 380 aa13.53□□□□□ -0.24
ERBB2-221ENST00000584888 F11RQ9Y624 299 aaKnown RBP13.53□□□□□ -0.24
ERBB2-221ENST00000584888 DISC1C4P0D8 188 aa13.52□□□□□ -0.25
ERBB2-221ENST00000584888 OR2C1O95371 312 aa13.52□□□□□ -0.25
ERBB2-221ENST00000584888 HLA-AP01891 365 aaKnown RBP13.52□□□□□ -0.25
ERBB2-221ENST00000584888 IGHV4-30-4P0DP06 118 aa13.52□□□□□ -0.25
ERBB2-221ENST00000584888 UCP1P25874 307 aa13.52□□□□□ -0.25
ERBB2-221ENST00000584888 CCDC71LQ8N9Z2 235 aa13.52□□□□□ -0.25
ERBB2-221ENST00000584888 VN1R17PQ8TDU5 208 aa13.52□□□□□ -0.25
ERBB2-221ENST00000584888 SLC2A8Q9NY64 477 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms