RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MS4A10Q96PG2 267 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 ATP5SQ99766 215 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 MAP1LC3B2A6NCE7 125 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 C22orf46C9J442 243 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 FCN1O00602 326 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 ADH4P08319 380 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 RTL8BQ17RB0 113 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 MST1LQ2TV78 715 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 OR5B12Q96R08 314 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 MAP1LC3BQ9GZQ8 125 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 ELOVL5Q9NYP7 299 aa8.4□□□□□ -1.06
RFFL-212ENST00000584655 TIMM8BQ9Y5J9 83 aaPredicted RBP8.4□□□□□ -1.06
RFFL-212ENST00000584655 A0A1B0GU03 582 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 CT45A6P0DMU7 189 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 CT45A5P0DMU8 189 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 CT45A7P0DMV0 189 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 HLA-GP17693 338 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 RND3P61587 244 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 IL15RAQ13261 267 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 ZNF561Q8N587 486 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 OR10D4PQ8NGN7 298 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 TIMD4Q96H15 378 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 BBC3Q96PG8 261 aaPredicted RBP8.4□□□□□ -1.07
RFFL-212ENST00000584655 RAB1BQ9H0U4 201 aa8.4□□□□□ -1.07
RFFL-212ENST00000584655 IGHV3-66A0A0C4DH42 116 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 TAAR5O14804 337 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 IGKV1D-33P01593 117 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 IGKV1-33P01594 117 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 IGFBP2P18065 325 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 OR4S2Q8NH73 311 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 CABLES2Q9BTV7 478 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 NDUFS6O75380 124 aaKnown RBP8.39□□□□□ -1.07
RFFL-212ENST00000584655 LINC00596Q86U02 117 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 PHYHIPLQ96FC7 376 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 GAL3ST2Q9H3Q3 398 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 HES4Q9HCC6 221 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 RBP4P02753 201 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 CHRNA7P36544 502 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 THBS3P49746 956 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 FAM78BQ5VT40 261 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 ODF3L1Q8IXM7 274 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 RAB40CQ96S21 281 aa8.39□□□□□ -1.07
RFFL-212ENST00000584655 IFNL4K9M1U5 179 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 CYB5BO43169 146 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 AREGP15514 252 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 LOXP28300 417 aaPredicted RBP8.38□□□□□ -1.07
RFFL-212ENST00000584655 SSBP2P81877 361 aaPredicted RBP8.38□□□□□ -1.07
RFFL-212ENST00000584655 RUSC1-AS1Q66K80 236 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 PRR27Q6MZM9 219 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 IGF2-ASQ6U949 168 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 ZNF295-AS1Q8N0V1 137 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 NIPBLQ6KC79 2804 aaeCLIP8.38□□□□□ -1.07
RFFL-212ENST00000584655 TRAV5A0A0B4J249 113 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 ATP5J2P56134 94 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 GAMTQ14353 236 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 LCNL1Q6ZST4 164 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 OR4P4Q8NGL7 312 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 RCC1LQ96I51 464 aaKnown RBP8.38□□□□□ -1.07
RFFL-212ENST00000584655 LURAP1Q96LR2 239 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 ZNF251Q9BRH9 671 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 ARV1Q9H2C2 271 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 B9A039 149 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 ZNF207O43670 478 aaKnown RBP8.38□□□□□ -1.07
RFFL-212ENST00000584655 FOXH1O75593 365 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 NPY1RP25929 384 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 SULT1A2P50226 295 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 DEFA6Q01524 100 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 ECSCRQ19T08 205 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 Q8NFD4 153 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 OR8B3Q8NGG8 313 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 OR8B2Q96RD0 313 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 NACAE9PAV3 2078 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 MXRA5Q9NR99 2828 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 GAPDHP04406 335 aaKnown RBP8.38□□□□□ -1.07
RFFL-212ENST00000584655 OR10J1P30954 320 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 NPIPB3Q92617 1050 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 RAB24Q969Q5 203 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 DERL1Q9BUN8 251 aa8.38□□□□□ -1.07
RFFL-212ENST00000584655 RPUSD1Q9UJJ7 312 aaKnown RBP8.38□□□□□ -1.07
RFFL-212ENST00000584655 TIMM23O14925 209 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 CD1BP29016 333 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 UQCC3Q6UW78 93 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 IL34Q6ZMJ4 242 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 RAB1CQ92928 201 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 METTL1Q9UBP6 276 aaKnown RBP8.37□□□□□ -1.07
RFFL-212ENST00000584655 HPRT1P00492 218 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 FABP4P15090 132 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 LMO1P25800 156 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 RHEBQ15382 184 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 SPNS3Q6ZMD2 512 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 RPP25LQ8N5L8 163 aaKnown RBP8.37□□□□□ -1.07
RFFL-212ENST00000584655 SEC11CQ9BY50 192 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 JPT1Q9UK76 154 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 RBFOX3A6NFN3 312 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 HIST1H2BAQ96A08 127 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 GNB4Q9HAV0 340 aa8.37□□□□□ -1.07
RFFL-212ENST00000584655 BARX1Q9HBU1 254 aaPredicted RBP8.37□□□□□ -1.07
RFFL-212ENST00000584655 PHOX2AO14813 284 aa8.36□□□□□ -1.07
RFFL-212ENST00000584655 SMAD7O15105 426 aaKnown RBP8.36□□□□□ -1.07
RFFL-212ENST00000584655 TCL1AP56279 114 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms