RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 WFIKKN1Q96NZ8 548 aa11.24□□□□□ -0.61
SRSF1-205ENST00000582730 TCF19Q9Y242 345 aa11.24□□□□□ -0.61
SRSF1-205ENST00000582730 hADV38S2A0JD32 116 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 M0R143 59 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 RBFOX2O43251 390 aaKnown RBP eCLIP11.23□□□□□ -0.614e-10■■■■□ 23
SRSF1-205ENST00000582730 MYOD1P15172 320 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
SRSF1-205ENST00000582730 KIR2DS2P43631 304 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 RPL23P62829 140 aaKnown RBP11.23□□□□□ -0.61
SRSF1-205ENST00000582730 RPP30P78346 268 aaKnown RBP11.23□□□□□ -0.61
SRSF1-205ENST00000582730 IQCJQ1A5X6 159 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 GATAD1Q8WUU5 269 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 OR5B12Q96R08 314 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 CTXND1A0A1B0GTU2 59 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 MBP02144 154 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 CCL3L1P16619 93 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 THBS3P49746 956 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 OR4A47Q6IF82 309 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 NEUROG1Q92886 237 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 ENY2Q9NPA8 101 aa11.23□□□□□ -0.61
SRSF1-205ENST00000582730 RPL31P62899 125 aaKnown RBP11.22□□□□□ -0.61
SRSF1-205ENST00000582730 RBPJQ06330 500 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 GCSAMLQ5JQS6 135 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 BSNQ9UPA5 3926 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 TRAV38-1A0A0B4J264 116 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 K7ENP7 123 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 PSMB3P49720 205 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 FAM3BP58499 235 aaPredicted RBP11.22□□□□□ -0.61
SRSF1-205ENST00000582730 ERVFC1-1P60608 527 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 DDB2Q92466 427 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 NBASA2RRP1 2371 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 KBTBD11O94819 623 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 SFTPCP11686 197 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 MEF2BQ02080 365 aaPredicted RBP11.22□□□□□ -0.61
SRSF1-205ENST00000582730 RELQ04864 619 aaPredicted RBP11.22□□□□□ -0.61
SRSF1-205ENST00000582730 PATZ1Q9HBE1 687 aaKnown RBP11.22□□□□□ -0.61
SRSF1-205ENST00000582730 POLEQ07864 2286 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 IGF2RP11717 2491 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 TANC2Q9HCD6 1990 aa11.22□□□□□ -0.61
SRSF1-205ENST00000582730 PPIAL4EA0A075B759 164 aa11.21□□□□□ -0.61
SRSF1-205ENST00000582730 VSTM5A8MXK1 200 aa11.21□□□□□ -0.61
SRSF1-205ENST00000582730 PPIAL4DF5H284 164 aa11.21□□□□□ -0.61
SRSF1-205ENST00000582730 SCGB1D1O95968 90 aa11.21□□□□□ -0.61
SRSF1-205ENST00000582730 HRASP01112 189 aa11.21□□□□□ -0.61
SRSF1-205ENST00000582730 PPIAL4FP0DN26 164 aa11.21□□□□□ -0.61
SRSF1-205ENST00000582730 CDC34P49427 236 aaPredicted RBP11.21□□□□□ -0.61
SRSF1-205ENST00000582730 PDLIM3Q53GG5 364 aaPredicted RBP11.21□□□□□ -0.61
SRSF1-205ENST00000582730 ACTL10Q5JWF8 245 aa11.21□□□□□ -0.61
SRSF1-205ENST00000582730 CENPVQ7Z7K6 275 aaPredicted RBP11.21□□□□□ -0.61
SRSF1-205ENST00000582730 OR4F5Q8NH21 305 aa11.21□□□□□ -0.61
SRSF1-205ENST00000582730 OR4F4Q96R69 305 aa11.21□□□□□ -0.61
SRSF1-205ENST00000582730 PPIAL4AQ9Y536 164 aa11.21□□□□□ -0.61
SRSF1-205ENST00000582730 DSCAML1Q8TD84 2053 aa11.21□□□□□ -0.62
SRSF1-205ENST00000582730 TPRP12270 2363 aaKnown RBP11.21□□□□□ -0.62
SRSF1-205ENST00000582730 GFRA3O60609 400 aa11.21□□□□□ -0.62
SRSF1-205ENST00000582730 REG1BP48304 166 aa11.21□□□□□ -0.62
SRSF1-205ENST00000582730 ACOT6Q3I5F7 207 aaPredicted RBP11.21□□□□□ -0.62
SRSF1-205ENST00000582730 TEX36Q5VZQ5 186 aa11.21□□□□□ -0.62
SRSF1-205ENST00000582730 SLC35D1Q9NTN3 355 aa11.21□□□□□ -0.62
SRSF1-205ENST00000582730 PPP1R14DQ9NXH3 145 aa11.21□□□□□ -0.62
SRSF1-205ENST00000582730 RPUSD1Q9UJJ7 312 aaKnown RBP11.21□□□□□ -0.62
SRSF1-205ENST00000582730 KALRNO60229 2985 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 C15orf61A6NNL5 157 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 VDAC2P45880 294 aaPredicted RBP11.2□□□□□ -0.62
SRSF1-205ENST00000582730 WDR83OSQ9Y284 106 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 A0A1W2PPV4 95 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 FAM90A9PA6NNJ1 464 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 IGKV1-16P04430 117 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 RAB4AP20338 218 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.2□□□□□ -0.62
SRSF1-205ENST00000582730 ZNF439Q8NDP4 499 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 OR2T10Q8NGZ9 312 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 FAM216AQ8WUB2 273 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 SSMEM1Q8WWF3 244 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 ZCCHC14Q8WYQ9 949 aaKnown RBP11.2□□□□□ -0.62
SRSF1-205ENST00000582730 ADTRPQ96IZ2 230 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 DIRC2Q96SL1 478 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 PARLQ9H300 379 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 GAL3ST2Q9H3Q3 398 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 MS4A5Q9H3V2 200 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 NCOR1P1Q9H4R4 102 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 FKBP11Q9NYL4 201 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 POLR3KQ9Y2Y1 108 aaPredicted RBP11.2□□□□□ -0.62
SRSF1-205ENST00000582730 TET2Q6N021 2002 aaPredicted RBP11.2□□□□□ -0.62
SRSF1-205ENST00000582730 FAM90A27PA6NNH2 459 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 PAGE4O60829 102 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 UBE2G2P60604 165 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 VWC2Q2TAL6 325 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 C1orf194Q5T5A4 169 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 GBGT1Q8N5D6 347 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 NGBQ9NPG2 151 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 TMEM106BQ9NUM4 274 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 LINC00312Q9Y6C7 94 aa11.2□□□□□ -0.62
SRSF1-205ENST00000582730 ITGB1BP1O14713 200 aa11.19□□□□□ -0.62
SRSF1-205ENST00000582730 NPY1RP25929 384 aa11.19□□□□□ -0.62
SRSF1-205ENST00000582730 RTL8BQ17RB0 113 aa11.19□□□□□ -0.62
SRSF1-205ENST00000582730 LYPD2Q6UXB3 125 aa11.19□□□□□ -0.62
SRSF1-205ENST00000582730 SLC24A4Q8NFF2 622 aa11.19□□□□□ -0.62
SRSF1-205ENST00000582730 OR52E5Q8NH55 327 aa11.19□□□□□ -0.62
SRSF1-205ENST00000582730 ZNF835Q9Y2P0 537 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms