RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 H3BRM9 83 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 ORMDL3Q8N138 153 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 FADS6Q8N9I5 356 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 RNASEH2CQ8TDP1 164 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 IGHV3-23P01764 117 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 CIARTQ8N365 385 aaPredicted RBP12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 OTORQ9NRC9 128 aa12.28□□□□□ -0.44
CSNK1D-217ENST00000581241 CDCP2Q5VXM1 449 aa12.27□□□□□ -0.44
CSNK1D-217ENST00000581241 MBD3L1Q8WWY6 194 aa12.27□□□□□ -0.44
CSNK1D-217ENST00000581241 CHODLQ9H9P2 273 aa12.27□□□□□ -0.44
CSNK1D-217ENST00000581241 FER1L6-AS1Q8NA97 138 aa12.27□□□□□ -0.44
CSNK1D-217ENST00000581241 DICER1Q9UPY3 1922 aaKnown RBP12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 CEACAM4O75871 244 aa12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 TNFRSF18Q9Y5U5 241 aa12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 COL4A1P02462 1669 aa12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 IGKV3OR2-268A0A0C4DH90 116 aa12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 HIGD1CA8MV81 97 aa12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 PROB1E7EW31 1015 aa12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 SLC25A45Q8N413 288 aa12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 SSBP4Q9BWG4 385 aaPredicted RBP12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 IGKV1D-43A0A0B4J1Z2 117 aa12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 TMEM50AO95807 157 aa12.27□□□□□ -0.45
CSNK1D-217ENST00000581241 C1QTNF5Q9BXJ0 243 aa12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 FNDC4Q9H6D8 234 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 ZNF703Q9H7S9 590 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 LY6G6FQ5SQ64 297 aa12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 ELOVL5Q9NYP7 299 aa12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 TRAV9-2A0A087WT02 112 aa12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 TYMSP04818 313 aa12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 MPZP25189 248 aa12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 CD69Q07108 199 aa12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 FOXA2Q9Y261 457 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 MCM3APO60318 1980 aa12.26□□□□□ -0.45
CSNK1D-217ENST00000581241 M0R381 172 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 LY6EQ16553 131 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HEPN1Q6WQI6 88 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 ZNRF1Q8ND25 227 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 RTN4RL2Q86UN3 420 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 CACNG8Q8WXS5 425 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 RNF115Q9Y4L5 304 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 SCN3AQ9NY46 2000 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 UBR3Q6ZT12 1888 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST1H2BKO60814 126 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST1H2BJP06899 126 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST1H2BOP23527 126 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST1H2BBP33778 126 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST1H2BDP58876 126 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST1H2BCP62807 126 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 CCL20P78556 96 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST2H2BEQ16778 126 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 TEX29Q8N6K0 151 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST1H2BHQ93079 126 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 SLC25A28Q96A46 364 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST1H2BNQ99877 126 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST1H2BMQ99879 126 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 GNB1LQ9BYB4 327 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 RNASE7Q9H1E1 156 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 TMEM106BQ9NUM4 274 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 TGFAP01135 160 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 ATXN7O15265 892 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 PAX1P15863 534 aa12.25□□□□□ -0.45
CSNK1D-217ENST00000581241 IGHV3-66A0A0C4DH42 116 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 C9JCJ5 164 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 NKX2-8O15522 239 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 APOMO95445 188 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 OR13A1Q8NGR1 328 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 ZNF257Q9Y2Q1 563 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 RSPO4Q2I0M5 234 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 NRN1LQ496H8 165 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 SAP25Q8TEE9 199 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 WFDC1Q9HC57 220 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 C1QTNF9P0C862 333 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 UCNP55089 124 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 NR2C2APQ86WQ0 139 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 DNASE2BQ8WZ79 361 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 CHCHD1Q96BP2 118 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 ARID2Q68CP9 1835 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 RBMY1BA6NDE4 496 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 RBMY1EA6NEQ0 496 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 RBMY1DP0C7P1 496 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 RBMY1A1P0DJD3 496 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 RBMY1CP0DJD4 496 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 TIMM23BQ5SRD1 257 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 TIMP4Q99727 224 aa12.24□□□□□ -0.45
CSNK1D-217ENST00000581241 Q6ZT83 130 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 OSTCQ9NRP0 149 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 KBTBD11-OT1A0A1B0GTJ5 212 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 FAM90A1Q86YD7 464 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 CHCHD2Q9Y6H1 151 aaPredicted RBP12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 MUC21A0A0G2JKD1 596 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 MUC21A0A140T8X8 626 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 TMEM262E9PQX1 116 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 RNASE4P34096 147 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 MUC21Q5SSG8 566 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 NUP37Q8NFH4 326 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 TRAV8-2A0A0B4J237 113 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 PSMB11A5LHX3 300 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 PLAURQ03405 335 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms