RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ARL3P36405 182 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 MECP2P51608 486 aaKnown RBP12.68□□□□□ -0.38
SREBF1-219ENST00000580540 PIGPP57054 158 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 MRPS10P82664 201 aaKnown RBP12.68□□□□□ -0.38
SREBF1-219ENST00000580540 FAM209BQ5JX69 171 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 SLC25A24Q6NUK1 477 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 STEAP1BQ6NZ63 245 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 H2BFWTQ7Z2G1 175 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 ARRDC1Q8N5I2 433 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 ISOC1Q96CN7 298 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 SRSF8Q9BRL6 282 aaKnown RBP12.68□□□□□ -0.38
SREBF1-219ENST00000580540 PRNDQ9UKY0 176 aa12.68□□□□□ -0.38
SREBF1-219ENST00000580540 MFSD2BA6NFX1 497 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 CYB5BO43169 146 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 THOC7Q6I9Y2 204 aaKnown RBP12.67□□□□□ -0.38
SREBF1-219ENST00000580540 FAAP20Q6NZ36 180 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 LHFPL1Q86WI0 220 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 OR4A16Q8NH70 328 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 MRGPRFQ96AM1 343 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 CCDC140Q96MF4 163 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 TSC22D3Q99576 134 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 ZC4H2Q9NQZ6 224 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 NDUFA4L2Q9NRX3 87 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 COPZ2Q9P299 210 aa12.67□□□□□ -0.38
SREBF1-219ENST00000580540 H0Y980 276 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 IGKV1-39P01597 117 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 CD74P04233 296 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 IGKV1D-39P04432 117 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 FGF2P09038 288 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 SSBP1Q04837 148 aaKnown RBP12.66□□□□□ -0.38
SREBF1-219ENST00000580540 WT1-ASQ06250 92 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 GDPD1Q8N9F7 314 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 TERB2Q8NHR7 220 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 MCFD2Q8NI22 146 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 ZFAND1Q8TCF1 268 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 MARCH1Q8TCQ1 289 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 SMIM4Q8WVI0 70 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 LSM10Q969L4 123 aaKnown RBP12.66□□□□□ -0.38
SREBF1-219ENST00000580540 ZNF486Q96H40 463 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-219ENST00000580540 CXorf58Q96LI9 332 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 FAM212BQ9NTI7 297 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-219ENST00000580540 FKBP11Q9NYL4 201 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 THYN1Q9P016 225 aa12.66□□□□□ -0.38
SREBF1-219ENST00000580540 TRBV7-1A0A0A6YYK4 115 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 IGHV3-21A0A0B4J1V1 117 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 ZNF320A2RRD8 509 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 DBX1A6NMT0 343 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 DISC1C4P0D8 188 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 CLEC3BP05452 202 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 RND3P61587 244 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 MEF2DQ14814 521 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 HSD17B13Q7Z5P4 300 aaPredicted RBP12.65□□□□□ -0.38
SREBF1-219ENST00000580540 CCDC71LQ8N9Z2 235 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 OR13C8Q8NGS7 320 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 DYNLRB2Q8TF09 96 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 TMEM56Q96MV1 263 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 SLIRPQ9GZT3 109 aaKnown RBP12.65□□□□□ -0.38
SREBF1-219ENST00000580540 RABL2AQ9UBK7 228 aaPredicted RBP12.65□□□□□ -0.38
SREBF1-219ENST00000580540 RABL2BQ9UNT1 228 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 DMRT1Q9Y5R6 373 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 CEPT1Q9Y6K0 416 aa12.65□□□□□ -0.38
SREBF1-219ENST00000580540 C3orf85A0A1B0GTC6 90 aa12.64□□□□□ -0.39
SREBF1-219ENST00000580540 C15orf61A6NNL5 157 aa12.64□□□□□ -0.39
SREBF1-219ENST00000580540 NHLRC4P0CG21 123 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-219ENST00000580540 PTBP1P26599 531 aaKnown RBP eCLIP12.64□□□□□ -0.39
SREBF1-219ENST00000580540 GPR183P32249 361 aa12.64□□□□□ -0.39
SREBF1-219ENST00000580540 KLK9Q2XQG4 91 aa12.64□□□□□ -0.39
SREBF1-219ENST00000580540 SP6Q3SY56 376 aa12.64□□□□□ -0.39
SREBF1-219ENST00000580540 FAM106AQ4KMX7 169 aa12.64□□□□□ -0.39
SREBF1-219ENST00000580540 CADM3Q8N126 398 aa12.64□□□□□ -0.39
SREBF1-219ENST00000580540 OR5B3Q8NH48 314 aa12.64□□□□□ -0.39
SREBF1-219ENST00000580540 TP53RKQ96S44 253 aa12.64□□□□□ -0.39
SREBF1-219ENST00000580540 KLK9Q9UKQ9 250 aa12.64□□□□□ -0.39
SREBF1-219ENST00000580540 IGHV3-35A0A0C4DH35 117 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 FABP12A6NFH5 140 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 CTDSPLO15194 276 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 AKAIN1P0CW23 69 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 EDN2P20800 178 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 TNFSF8P32971 234 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 AKR1C2P52895 323 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 IZUMO4Q1ZYL8 232 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 TRIM16LQ309B1 348 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 LCN12Q6JVE5 192 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 GPHB5Q86YW7 130 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 Q8N402 240 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 ZNF502Q8TBZ5 544 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 TMEM14BQ9NUH8 114 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 SIGLEC8Q9NYZ4 499 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 RSL24D1Q9UHA3 163 aaKnown RBP12.63□□□□□ -0.39
SREBF1-219ENST00000580540 C14orf166Q9Y224 244 aaKnown RBP12.63□□□□□ -0.39
SREBF1-219ENST00000580540 F11RQ9Y624 299 aaKnown RBP12.63□□□□□ -0.39
SREBF1-219ENST00000580540 SELENOKQ9Y6D0 94 aa12.63□□□□□ -0.39
SREBF1-219ENST00000580540 IZUMO1RA6ND01 250 aa12.62□□□□□ -0.39
SREBF1-219ENST00000580540 C2orf70A6NJV1 201 aa12.62□□□□□ -0.39
SREBF1-219ENST00000580540 CTSDP07339 412 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-219ENST00000580540 FRMD6-AS1P0C7T7 363 aa12.62□□□□□ -0.39
SREBF1-219ENST00000580540 FOLR2P14207 255 aa12.62□□□□□ -0.39
SREBF1-219ENST00000580540 MFAP2P55001 183 aa12.62□□□□□ -0.39
SREBF1-219ENST00000580540 PLET1Q6UQ28 207 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms