RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TNFAIP6P98066 277 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-209ENST00000580095 PDLIM3Q53GG5 364 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-209ENST00000580095 NEIL1Q96FI4 390 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-209ENST00000580095 JPT1Q9UK76 154 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 PTPRBP23467 1997 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 KLK10O43240 276 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 FOXH1O75593 365 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 PFN1P07737 140 aaKnown RBP8.62□□□□□ -1.03
TOP3A-209ENST00000580095 VDAC2P45880 294 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-209ENST00000580095 REG1BP48304 166 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 MLANAQ16655 118 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 ACOT6Q3I5F7 207 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-209ENST00000580095 TCF23Q7RTU1 214 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 NUDT10Q8NFP7 164 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 C1orf159Q96HA4 380 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 PXMP4Q9Y6I8 212 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 ABCA4P78363 2273 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 C17orf112F2Z3M2 114 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 M0QZK8 103 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 TMPRSS2O15393 492 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 PLXNB1O43157 2135 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 YPEL1O60688 119 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 IGHV1-46P01743 117 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
TOP3A-209ENST00000580095 GATA2P23769 480 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-209ENST00000580095 VWC2Q2TAL6 325 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 TIMM23BQ5SRD1 257 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 OR4A47Q6IF82 309 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 YPEL2Q96QA6 119 aa8.62□□□□□ -1.03
TOP3A-209ENST00000580095 ATRXP46100 2492 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 ZNF891A8MT65 544 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-209ENST00000580095 GLRXP35754 106 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 NBL1P41271 181 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 PRB3Q04118 309 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-209ENST00000580095 LHFPL4Q7Z7J7 247 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 PPP1R35Q8TAP8 253 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 GGTLC1Q9BX51 225 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 CBLN4Q9NTU7 201 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 FUT9Q9Y231 359 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 IGF2RP11717 2491 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 TRBV20OR9-2A0A075B6H5 130 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 TRBV24-1A0A075B6N3 115 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 A0A1B0GUS0 222 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 TMEM250H0YL14 139 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 CA2P00918 260 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 LHBP01229 141 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 IGHV3-48P01763 117 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 THBS3P49746 956 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 TCF15Q12870 199 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 WFDC8Q8IUA0 241 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 OR5B12Q96R08 314 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 TMEM242Q9NWH2 141 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 RNF24Q9Y225 148 aa8.61□□□□□ -1.03
TOP3A-209ENST00000580095 KBTBD11-OT1A0A1B0GTJ5 212 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 SCO2A0A1W2PP80 73 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 SRRM4A7MD48 611 aaKnown RBP8.6□□□□□ -1.03
TOP3A-209ENST00000580095 PPP5D1E7EU14 171 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 F2RL2O00254 374 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 SIAH2O43255 324 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 FAM78BQ5VT40 261 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 RBMXL3Q8N7X1 1067 aaKnown RBP8.6□□□□□ -1.03
TOP3A-209ENST00000580095 ZCCHC14Q8WYQ9 949 aaKnown RBP8.6□□□□□ -1.03
TOP3A-209ENST00000580095 MANBALQ9NQG1 85 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 TRGV10A0A0A0MS01 117 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 A0A1W2PN81 502 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 RBFOX2O43251 390 aaKnown RBP eCLIP8.6□□□□□ -1.03
TOP3A-209ENST00000580095 PRSS33Q8NF86 280 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 DDB2Q92466 427 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 PACRGQ96M98 296 aaPredicted RBP8.6□□□□□ -1.03
TOP3A-209ENST00000580095 HIST1H2BLQ99880 126 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 LPAR2Q9HBW0 351 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 RNF7Q9UBF6 113 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 NAV3Q8IVL0 2385 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 CUL9Q8IWT3 2517 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 PRSS46E5RG02 174 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 CGB3P0DN86 165 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 CGB7P0DN87 165 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 GZMBP10144 247 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 CCL3L1P16619 93 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 IGFBP2P18065 325 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 CCKARP32238 428 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 MZT1Q08AG7 82 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 ASPHD1Q5U4P2 390 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 TRAT1Q6PIZ9 186 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 LINC01551Q86U37 167 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 TCTEX1D1Q8N7M0 179 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 OR10W1Q8NGF6 305 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 OR4S2Q8NH73 311 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 GAFA1Q96PS6 74 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 LRFN3Q9BTN0 628 aa8.6□□□□□ -1.03
TOP3A-209ENST00000580095 YTHDF2Q9Y5A9 579 aaKnown RBP8.6□□□□□ -1.03
TOP3A-209ENST00000580095 XKRY2A2RUG3 117 aa8.59□□□□□ -1.03
TOP3A-209ENST00000580095 NDUFS8O00217 210 aa8.59□□□□□ -1.03
TOP3A-209ENST00000580095 CEACAM4O75871 244 aa8.59□□□□□ -1.03
TOP3A-209ENST00000580095 IL6RP08887 468 aaPredicted RBP8.59□□□□□ -1.03
TOP3A-209ENST00000580095 CD40P25942 277 aa8.59□□□□□ -1.03
TOP3A-209ENST00000580095 PTTG1IPP53801 180 aa8.59□□□□□ -1.03
TOP3A-209ENST00000580095 DLX1P56177 255 aa8.59□□□□□ -1.03
TOP3A-209ENST00000580095 CTDSP1Q9GZU7 261 aa8.59□□□□□ -1.03
TOP3A-209ENST00000580095 NPY1RP25929 384 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms