RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 TEX22C9J3V5 150 aa12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 H3BUA1 57 aa12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 APELAP0DMC3 54 aa12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 PSMB8P28062 276 aa12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 RAB9AP51151 201 aa12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 HSPE1P61604 102 aaKnown RBP12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 HSD17B13Q7Z5P4 300 aaPredicted RBP12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 NDUFA11Q86Y39 141 aa12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 MRPL41Q8IXM3 137 aaKnown RBP12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 RNF152Q8N8N0 203 aa12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 FAM110DQ8TAY7 271 aaPredicted RBP12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 PDCD10Q9BUL8 212 aa12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 HINT2Q9BX68 163 aa12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 CACFD1Q9UGQ2 172 aa12.17□□□□□ -0.46
SLC6A4-205ENST00000579221 A0A1B0GW64 132 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 CGB1A6NKQ9 187 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 DBX1A6NMT0 343 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 SOX15O60248 233 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 IFNA17P01571 189 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 IL5P05113 134 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 KHDC1LQ5JSQ8 128 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 Q6ZRM9 215 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 MS4A10Q96PG2 267 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 SLA2Q9H6Q3 261 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 COA4Q9NYJ1 87 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 TMED3Q9Y3Q3 217 aa12.16□□□□□ -0.46
SLC6A4-205ENST00000579221 A0A1B0GU03 582 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 NPIPB5A8MRT5 1133 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 INMT-MINDY4F8WBC2 141 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 ST8SIA3O43173 380 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 BRI3O95415 125 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 DHFRP00374 187 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 IFNA21P01568 189 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 RPLP1P05386 114 aaKnown RBP12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 CRYGCP07315 174 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 HOXB5P09067 269 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 SULT1A3P0DMM9 295 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 SULT1A4P0DMN0 295 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 PSMB6P28072 239 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 DCTN2Q13561 401 aaKnown RBP12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 SMCO1Q147U7 214 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 NSUN5P1Q3KNT7 163 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 NMSQ5H8A3 153 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 OR52B4Q8NGK2 314 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 ZNF431Q8TF32 576 aaPredicted RBP12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 MITD1Q8WV92 249 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 KLK15Q9H2R5 256 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 CACNG5Q9UF02 275 aa12.15□□□□□ -0.46
SLC6A4-205ENST00000579221 A0A1W2PRX2 142 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 TRGV3P03979 118 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 OR13C7P0DN81 318 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 SLC25A6P12236 298 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 AREGP15514 252 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 CDX1P47902 265 aaPredicted RBP12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 SPCS3P61009 180 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 RPL23AP62750 156 aaKnown RBP12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 PRCDQ00LT1 54 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 HIST2H2BDQ6DRA6 164 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 LCNL1Q6ZST4 164 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 ZNF491Q8N8L2 437 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 OR10W1Q8NGF6 305 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 OR52E5Q8NH55 327 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 SEC22CQ9BRL7 303 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 MARVELD1Q9BSK0 173 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 GPN1Q9HCN4 374 aaPredicted RBP12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
SLC6A4-205ENST00000579221 IGLC7A0M8Q6 106 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 M0QZ24 198 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 CYB5BO43169 146 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 PRAF2O60831 178 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 PTTG1O95997 202 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 DEFA4P12838 97 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 CTRB1P17538 263 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 TPPP2P59282 170 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 ERHP84090 104 aaKnown RBP12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 AARDQ4LEZ3 155 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 GGNBP1Q5YKI7 109 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 CTRB2Q6GPI1 263 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 UBE2E2Q96LR5 201 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 PLEKHA3Q9HB20 300 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 COL6A5A8TX70 2615 aa12.13□□□□□ -0.47
SLC6A4-205ENST00000579221 A0A0G2JLM5 398 aa12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 NUDT19A8MXV4 375 aa12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 REG1AP05451 166 aa12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 HIST1H1BP16401 226 aaKnown RBP12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 WT1-ASQ06250 92 aa12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 KIAA0141Q14154 515 aaPredicted RBP12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 C2orf68Q2NKX9 166 aa12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 C12orf45Q8N5I9 185 aaPredicted RBP12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 UXS1Q8NBZ7 420 aa12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 OR1S1Q8NH92 325 aa12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 MYOZ3Q8TDC0 251 aa12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 USMG5Q96IX5 58 aa12.12□□□□□ -0.47
SLC6A4-205ENST00000579221 C13orf42A0A1B0GVH6 325 aa12.11□□□□□ -0.47
SLC6A4-205ENST00000579221 ADARB2-AS1A8MUL3 147 aa12.11□□□□□ -0.47
SLC6A4-205ENST00000579221 ADAP1O75689 374 aa12.11□□□□□ -0.47
SLC6A4-205ENST00000579221 PRH1P02810 166 aa12.11□□□□□ -0.47
SLC6A4-205ENST00000579221 SPNP16150 400 aa12.11□□□□□ -0.47
SLC6A4-205ENST00000579221 OR2C3Q8N628 320 aa12.11□□□□□ -0.47
SLC6A4-205ENST00000579221 KLHL30-AS1Q8NEE0 82 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms