RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 FAM209BQ5JX69 171 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 SPANXN2Q5MJ10 180 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF343Q6P1L6 599 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 HSD17B13Q7Z5P4 300 aaPredicted RBP5.05□□□□□ -1.6
TRAF4-213ENST00000578917 OR10W1Q8NGF6 305 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 OR6Q1Q8NGQ2 317 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 OR13C8Q8NGS7 320 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 MARCH1Q8TCQ1 289 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 EEF1AKMT3Q96AZ1 226 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 RRNAD1Q96FB5 475 aaKnown RBP5.05□□□□□ -1.6
TRAF4-213ENST00000578917 SCGB3A2Q96PL1 93 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 PRR25Q96S07 402 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 PRRT1Q99946 306 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 PDCD10Q9BUL8 212 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 SLIRPQ9GZT3 109 aaKnown RBP5.05□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF256Q9Y2P7 627 aaPredicted RBP5.05□□□□□ -1.6
TRAF4-213ENST00000578917 KCNIP3Q9Y2W7 256 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 S4R3C0 116 aa5.05□□□□□ -1.6
TRAF4-213ENST00000578917 TRBV9A0A0B4J1U6 114 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 E7EUB6 86 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 K7EIL1 84 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 GSTZ1O43708 216 aaPredicted RBP5.04□□□□□ -1.6
TRAF4-213ENST00000578917 GGCTO75223 188 aaKnown RBP5.04□□□□□ -1.6
TRAF4-213ENST00000578917 NDUFB8O95169 186 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 OR2C1O95371 312 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 IFNA17P01571 189 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 CD74P04233 296 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 CLEC3BP05452 202 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 ARL3P36405 182 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 SNCAP37840 140 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 ERHP84090 104 aaKnown RBP5.04□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF45Q02386 682 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 KLF5Q13887 457 aaPredicted RBP5.04□□□□□ -1.6
TRAF4-213ENST00000578917 POU2AF1Q16633 256 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 THOC7Q6I9Y2 204 aaKnown RBP5.04□□□□□ -1.6
TRAF4-213ENST00000578917 FAAP20Q6NZ36 180 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 ACSM6Q6P461 480 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 CLEC19AQ6UXS0 136 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 C19orf35Q6ZS72 473 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 Q8N402 240 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 TOMM5Q8N4H5 51 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 OR51S1Q8NGJ8 323 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 OR9G4Q8NGQ1 327 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 OR5B3Q8NH48 314 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 LSM10Q969L4 123 aaKnown RBP5.04□□□□□ -1.6
TRAF4-213ENST00000578917 MRGPRFQ96AM1 343 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 CXorf58Q96LI9 332 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 SRSF8Q9BRL6 282 aaKnown RBP5.04□□□□□ -1.6
TRAF4-213ENST00000578917 ENY2Q9NPA8 101 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 FAM212BQ9NTI7 297 aaPredicted RBP5.04□□□□□ -1.6
TRAF4-213ENST00000578917 PEMTQ9UBM1 199 aa5.04□□□□□ -1.6
TRAF4-213ENST00000578917 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.03□□□□□ -1.6
TRAF4-213ENST00000578917 TRBV7-1A0A0A6YYK4 115 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 IGLC7A0M8Q6 106 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 ANKRD20A5PA0PJZ0 165 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 PPP5D1E7EU14 171 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 H0Y980 276 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF701M0R085 212 aaPredicted RBP5.03□□□□□ -1.6
TRAF4-213ENST00000578917 B3GALNT1O75752 331 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 TRBV12-3P01733 135 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 HLA-AP01891 365 aaKnown RBP5.03□□□□□ -1.6
TRAF4-213ENST00000578917 CRYGCP07315 174 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 CTSDP07339 412 aaPredicted RBP5.03□□□□□ -1.6
TRAF4-213ENST00000578917 FGF2P09038 288 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 AKR1C4P17516 323 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 CTRB1P17538 263 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 RND3P61587 244 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 HSPE1P61604 102 aaKnown RBP5.03□□□□□ -1.6
TRAF4-213ENST00000578917 SURF2Q15527 256 aaPredicted RBP5.03□□□□□ -1.6
TRAF4-213ENST00000578917 ZNF57Q68EA5 555 aaPredicted RBP5.03□□□□□ -1.6
TRAF4-213ENST00000578917 CTRB2Q6GPI1 263 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 PLET1Q6UQ28 207 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 LHFPL1Q86WI0 220 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 SGPP2Q8IWX5 399 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 GDPD1Q8N9F7 314 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 UBAC2Q8NBM4 344 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 OR4C16Q8NGL9 310 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 OR1L6Q8NGR2 347 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 SEC22AQ96IW7 307 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 TP53RKQ96S44 253 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 NXF2Q9GZY0 626 aaKnown RBP5.03□□□□□ -1.6
TRAF4-213ENST00000578917 ZC4H2Q9NQZ6 224 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 NDUFA4L2Q9NRX3 87 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 NDUFA13Q9P0J0 144 aa5.03□□□□□ -1.6
TRAF4-213ENST00000578917 TENM3Q9P273 2699 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 IGLV11-55A0A075B6I3 123 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 IGHV3-21A0A0B4J1V1 117 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 A0A1B0GW64 132 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 CGB1A6NKQ9 187 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 C15orf61A6NNL5 157 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 BMPR1BO00238 502 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 OR5AC1P0C628 307 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 ANXA3P12429 323 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 GP9P14770 177 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 SPNP16150 400 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 PTBP1P26599 531 aaKnown RBP eCLIP5.02□□□□□ -1.61
TRAF4-213ENST00000578917 GPR183P32249 361 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 SUB1P53999 127 aaKnown RBP eCLIP5.02□□□□□ -1.61
TRAF4-213ENST00000578917 DHODHQ02127 395 aa5.02□□□□□ -1.61
TRAF4-213ENST00000578917 WT1-ASQ06250 92 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms