RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 EHFQ9NZC4 300 aa6.65□□□□□ -1.34
GGA3-207ENST00000578896 IGHV3-49A0A0A0MS15 119 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 CXorf65A6NEN9 183 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 DBX1A6NMT0 343 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 RBFOX2O43251 390 aaKnown RBP eCLIP6.64□□□□□ -1.35
GGA3-207ENST00000578896 TGOLN2O43493 480 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 PGLYRP1O75594 196 aaPredicted RBP6.64□□□□□ -1.35
GGA3-207ENST00000578896 RLN1P04808 185 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 TRAPPC2P0DI81 140 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 TRAPPC2BP0DI82 140 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 RPL35AP18077 110 aaKnown RBP6.64□□□□□ -1.35
GGA3-207ENST00000578896 PTBP1P26599 531 aaKnown RBP eCLIP6.64□□□□□ -1.35
GGA3-207ENST00000578896 LPAR6P43657 344 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 HERV-K104P61576 105 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 LSM3P62310 102 aaKnown RBP6.64□□□□□ -1.35
GGA3-207ENST00000578896 ZNF124Q15973 351 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 POU2AF1Q16633 256 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 DEFB135Q30KP9 77 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 OR2C3Q8N628 320 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 UBAC2Q8NBM4 344 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 ZBTB34Q8NCN2 500 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 OR5AP2Q8NGF4 316 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 GIMAP1Q8WWP7 306 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 FCAMRQ8WWV6 532 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 FCGR1BQ92637 280 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 ZNF2Q9BSG1 426 aaPredicted RBP6.64□□□□□ -1.35
GGA3-207ENST00000578896 QTRT1Q9BXR0 403 aaKnown RBP6.64□□□□□ -1.35
GGA3-207ENST00000578896 ZNF436Q9C0F3 470 aaPredicted RBP6.64□□□□□ -1.35
GGA3-207ENST00000578896 DIABLOQ9NR28 239 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 MRPL27Q9P0M9 148 aaKnown RBP6.64□□□□□ -1.35
GGA3-207ENST00000578896 UFC1Q9Y3C8 167 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 ETV7Q9Y603 341 aa6.64□□□□□ -1.35
GGA3-207ENST00000578896 TRAV25A0A0B4J276 109 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 F8W735 103 aaPredicted RBP6.63□□□□□ -1.35
GGA3-207ENST00000578896 LY6G6CO95867 125 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 KRASP01116 189 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 IGHV3-48P01763 117 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 SERPINE2P07093 398 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 G6PCP35575 357 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 MSMO1Q15800 293 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 ANKRD55Q3KP44 614 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 ODF3L2Q3SX64 289 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 GDPD1Q8N9F7 314 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 OR1L8Q8NGR8 309 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 OR5B3Q8NH48 314 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 SCARB1Q8WTV0 552 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 TMEM190Q8WZ59 177 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 AIFM2Q9BRQ8 373 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 PLEKHA2Q9HB19 425 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 IFT46Q9NQC8 304 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 OR51B2Q9Y5P1 312 aa6.63□□□□□ -1.35
GGA3-207ENST00000578896 IGKV3-7A0A075B6H7 116 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 IGHV3OR16-13A0A075B7E8 117 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 IGHV3-74A0A0B4J1X5 117 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 MARCH11A6NNE9 402 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 K7EIM0 57 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 XRCC3O43542 346 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 SPRY2O43597 315 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 CTSDP07339 412 aaPredicted RBP6.62□□□□□ -1.35
GGA3-207ENST00000578896 F2RP25116 425 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 HLA-DMAP28067 261 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 ADMP35318 185 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 RPS19P39019 145 aaKnown RBP6.62□□□□□ -1.35
GGA3-207ENST00000578896 TFPI2P48307 235 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 TAS2R20P59543 309 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 ERVK-16P61578 105 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 PHLDA2Q53GA4 152 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 Q56UQ5 140 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 LYG2Q86SG7 212 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 APRG1Q8IVJ8 170 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 SLC38A6Q8IZM9 456 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 VN1R17PQ8TDU5 208 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 LINC00476Q8WZB0 136 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 MARC2Q969Z3 335 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 ZNF414Q96IQ9 312 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 YTHDF1Q9BYJ9 559 aaKnown RBP6.62□□□□□ -1.35
GGA3-207ENST00000578896 FXYD6Q9H0Q3 95 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 C5orf66Q9H5L9 145 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 NDUFA4L2Q9NRX3 87 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 C21orf62Q9NYP8 219 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 THYN1Q9P016 225 aa6.62□□□□□ -1.35
GGA3-207ENST00000578896 F11RQ9Y624 299 aaKnown RBP6.62□□□□□ -1.35
GGA3-207ENST00000578896 DNAH6Q9C0G6 4158 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 A0A0A6YYH2 397 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 A6NJ64 397 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 TSPAN4O14817 238 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 FCGR2BP31994 310 aaPredicted RBP6.61□□□□□ -1.35
GGA3-207ENST00000578896 CBX5P45973 191 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 ELLP55199 621 aaPredicted RBP6.61□□□□□ -1.35
GGA3-207ENST00000578896 SCAND1P57086 179 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 TNFRSF9Q07011 255 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 SPINK9Q5DT21 86 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 TMEM69Q5SWH9 247 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 DHRS11Q6UWP2 260 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 LYSMD2Q8IV50 215 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 SAMD12Q8N8I0 201 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 OR5H2Q8NGV7 314 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 CD300LFQ8TDQ1 290 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 LSM10Q969L4 123 aaKnown RBP6.61□□□□□ -1.35
GGA3-207ENST00000578896 MOB3AQ96BX8 217 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms