RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 PTBP1P26599 531 aaKnown RBP eCLIP17.42■□□□□ 0.383e-7■■■□□ 15.2
VAPA-205ENST00000578314 ARL3P36405 182 aa17.42■□□□□ 0.38
VAPA-205ENST00000578314 WT1-ASQ06250 92 aa17.42■□□□□ 0.38
VAPA-205ENST00000578314 LCN12Q6JVE5 192 aa17.42■□□□□ 0.38
VAPA-205ENST00000578314 LHFPL1Q86WI0 220 aa17.42■□□□□ 0.38
VAPA-205ENST00000578314 THYN1Q9P016 225 aa17.42■□□□□ 0.38
VAPA-205ENST00000578314 S4R3C0 116 aa17.42■□□□□ 0.38
VAPA-205ENST00000578314 SNAPC5O75971 98 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 CD3DP04234 171 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 IFNA6P05013 189 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 SERPINE2P07093 398 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 OR13C7P0DN81 318 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 IGHV4-30-4P0DP06 118 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 RNASE12Q5GAN4 147 aaKnown RBP17.41■□□□□ 0.38
VAPA-205ENST00000578314 RNASE10Q5GAN6 216 aaKnown RBP17.41■□□□□ 0.38
VAPA-205ENST00000578314 ARRDC1Q8N5I2 433 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 GDPD1Q8N9F7 314 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 C19orf73Q9NVV2 129 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 FKBP11Q9NYL4 201 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 PRNDQ9UKY0 176 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 NSG2Q9Y328 171 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 OR51B2Q9Y5P1 312 aa17.41■□□□□ 0.38
VAPA-205ENST00000578314 IZUMO1RA6ND01 250 aa17.4■□□□□ 0.38
VAPA-205ENST00000578314 MFSD2BA6NFX1 497 aa17.4■□□□□ 0.38
VAPA-205ENST00000578314 CTDSP2O14595 271 aa17.4■□□□□ 0.38
VAPA-205ENST00000578314 CLEC3BP05452 202 aa17.4■□□□□ 0.38
VAPA-205ENST00000578314 CLVS1Q8IUQ0 354 aaPredicted RBP17.4■□□□□ 0.38
VAPA-205ENST00000578314 OR5B3Q8NH48 314 aa17.4■□□□□ 0.38
VAPA-205ENST00000578314 ZNF502Q8TBZ5 544 aa17.4■□□□□ 0.38
VAPA-205ENST00000578314 RAB2BQ8WUD1 216 aa17.4■□□□□ 0.38
VAPA-205ENST00000578314 LSM10Q969L4 123 aaKnown RBP17.4■□□□□ 0.38
VAPA-205ENST00000578314 ZNF486Q96H40 463 aaPredicted RBP17.4■□□□□ 0.38
VAPA-205ENST00000578314 SEC22AQ96IW7 307 aa17.4■□□□□ 0.38
VAPA-205ENST00000578314 TSC22D3Q99576 134 aa17.4■□□□□ 0.38
VAPA-205ENST00000578314 BCL7BQ9BQE9 202 aa17.4■□□□□ 0.38
VAPA-205ENST00000578314 C2orf70A6NJV1 201 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 CYB5BO43169 146 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 IGKV1-39P01597 117 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 CD74P04233 296 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 IGKV1D-39P04432 117 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 TMBIM6P55061 237 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 RND3P61587 244 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 FAM106AQ4KMX7 169 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 SGPP2Q8IWX5 399 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 TMEM229BQ8NBD8 167 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 TMEM14BQ9NUH8 114 aa17.39■□□□□ 0.37
VAPA-205ENST00000578314 GABARAPH6UMI1 98 aa17.38■□□□□ 0.37
VAPA-205ENST00000578314 RGS5O15539 181 aa17.38■□□□□ 0.37
VAPA-205ENST00000578314 FOLR2P14207 255 aa17.38■□□□□ 0.37
VAPA-205ENST00000578314 DEFB114Q30KQ6 69 aa17.38■□□□□ 0.37
VAPA-205ENST00000578314 CD300EQ496F6 205 aaPredicted RBP17.38■□□□□ 0.37
VAPA-205ENST00000578314 LAX1Q8IWV1 398 aa17.38■□□□□ 0.37
VAPA-205ENST00000578314 VN1R17PQ8TDU5 208 aa17.38■□□□□ 0.37
VAPA-205ENST00000578314 STAB2Q8WWQ8 2551 aa17.38■□□□□ 0.37
VAPA-205ENST00000578314 DBX1A6NMT0 343 aa17.37■□□□□ 0.37
VAPA-205ENST00000578314 C15orf61A6NNL5 157 aa17.37■□□□□ 0.37
VAPA-205ENST00000578314 MRPS10P82664 201 aaKnown RBP17.37■□□□□ 0.37
VAPA-205ENST00000578314 SSBP1Q04837 148 aaKnown RBP17.37■□□□□ 0.37
VAPA-205ENST00000578314 DYNC2LI1Q8TCX1 351 aa17.37■□□□□ 0.37
VAPA-205ENST00000578314 TMEM56Q96MV1 263 aa17.37■□□□□ 0.37
VAPA-205ENST00000578314 HINT2Q9BX68 163 aa17.37■□□□□ 0.37
VAPA-205ENST00000578314 TECRQ9NZ01 308 aaKnown RBP17.37■□□□□ 0.37
VAPA-205ENST00000578314 F11RQ9Y624 299 aaKnown RBP17.37■□□□□ 0.37
VAPA-205ENST00000578314 ZNF785A8K8V0 405 aa17.36■□□□□ 0.37
VAPA-205ENST00000578314 PGAM2P15259 253 aa17.36■□□□□ 0.37
VAPA-205ENST00000578314 CBLN1P23435 193 aa17.36■□□□□ 0.37
VAPA-205ENST00000578314 RPL5P46777 297 aaKnown RBP17.36■□□□□ 0.37
VAPA-205ENST00000578314 MFAP2P55001 183 aa17.36■□□□□ 0.37
VAPA-205ENST00000578314 TAS2R19P59542 299 aa17.36■□□□□ 0.37
VAPA-205ENST00000578314 SLC25A24Q6NUK1 477 aa17.36■□□□□ 0.37
VAPA-205ENST00000578314 H2BFWTQ7Z2G1 175 aa17.36■□□□□ 0.37
VAPA-205ENST00000578314 GTSCR1Q86UQ5 136 aa17.36■□□□□ 0.37
VAPA-205ENST00000578314 OR4D10Q8NGI6 311 aa17.36■□□□□ 0.37
VAPA-205ENST00000578314 TERB2Q8NHR7 220 aa17.36■□□□□ 0.37
VAPA-205ENST00000578314 CCDC59Q9P031 241 aaKnown RBP17.36■□□□□ 0.37
VAPA-205ENST00000578314 A8MWP6 167 aa17.35■□□□□ 0.37
VAPA-205ENST00000578314 PI3P19957 117 aa17.35■□□□□ 0.37
VAPA-205ENST00000578314 EDN2P20800 178 aa17.35■□□□□ 0.37
VAPA-205ENST00000578314 PIGPP57054 158 aa17.35■□□□□ 0.37
VAPA-205ENST00000578314 OR1L6Q8NGR2 347 aa17.35■□□□□ 0.37
VAPA-205ENST00000578314 DYNLRB2Q8TF09 96 aa17.35■□□□□ 0.37
VAPA-205ENST00000578314 ATP6V0BQ99437 205 aa17.35■□□□□ 0.37
VAPA-205ENST00000578314 ZC4H2Q9NQZ6 224 aa17.35■□□□□ 0.37
VAPA-205ENST00000578314 ZNF320A2RRD8 509 aa17.34■□□□□ 0.37
VAPA-205ENST00000578314 TMEM213A2RRL7 107 aa17.34■□□□□ 0.37
VAPA-205ENST00000578314 RAB3DO95716 219 aa17.34■□□□□ 0.37
VAPA-205ENST00000578314 GPR183P32249 361 aa17.34■□□□□ 0.37
VAPA-205ENST00000578314 STEAP1BQ6NZ63 245 aa17.34■□□□□ 0.37
VAPA-205ENST00000578314 OR4A16Q8NH70 328 aa17.34■□□□□ 0.37
VAPA-205ENST00000578314 MRGPRFQ96AM1 343 aa17.34■□□□□ 0.37
VAPA-205ENST00000578314 RCHY1Q96PM5 261 aa17.34■□□□□ 0.37
VAPA-205ENST00000578314 TM2D3Q9BRN9 247 aa17.34■□□□□ 0.37
VAPA-205ENST00000578314 RABL2AQ9UBK7 228 aaPredicted RBP17.34■□□□□ 0.37
VAPA-205ENST00000578314 RABL2BQ9UNT1 228 aa17.34■□□□□ 0.37
VAPA-205ENST00000578314 CTDSPLO15194 276 aa17.33■□□□□ 0.36
VAPA-205ENST00000578314 PLET1Q6UQ28 207 aa17.33■□□□□ 0.36
VAPA-205ENST00000578314 ZFAND1Q8TCF1 268 aa17.33■□□□□ 0.36
VAPA-205ENST00000578314 SMIM4Q8WVI0 70 aa17.33■□□□□ 0.36
VAPA-205ENST00000578314 ZNF436Q9C0F3 470 aaPredicted RBP17.33■□□□□ 0.36
VAPA-205ENST00000578314 ZMAT4Q9H898 229 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms