RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 FRMD6-AS1P0C7T7 363 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 LYL1P12980 280 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 MYOD1P15172 320 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 SPNP16150 400 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 PSMB6P28072 239 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 OR2B8PP59922 312 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 RHOGP84095 191 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 ATP5G2Q06055 141 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 SURF2Q15527 256 aaPredicted RBP12.29□□□□□ -0.44
VAPA-204ENST00000577901 FAAP20Q6NZ36 180 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 NECAP1Q8NC96 275 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 OR4C16Q8NGL9 310 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 OR13C8Q8NGS7 320 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 MARCH1Q8TCQ1 289 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 TSC22D3Q99576 134 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 SRSF8Q9BRL6 282 aaKnown RBP12.29□□□□□ -0.44
VAPA-204ENST00000577901 FKBP11Q9NYL4 201 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 SCP2D1Q9UJQ7 156 aa12.29□□□□□ -0.44
VAPA-204ENST00000577901 C14orf166Q9Y224 244 aaKnown RBP12.29□□□□□ -0.44
VAPA-204ENST00000577901 TRBV9A0A0B4J1U6 114 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 C3orf85A0A1B0GTC6 90 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 ANKRD34BA5PLL1 514 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 H0Y980 276 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 B3GALNT1O75752 331 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 ATG12O94817 140 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 TRAPPC2P0DI81 140 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 TRAPPC2BP0DI82 140 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 DEFA4P12838 97 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 ZP3P21754 424 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 SLURP1P55000 103 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 SPANXN2Q5MJ10 180 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 THOC7Q6I9Y2 204 aaKnown RBP12.28□□□□□ -0.44
VAPA-204ENST00000577901 ZNF343Q6P1L6 599 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 H2BFWTQ7Z2G1 175 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 HSD17B13Q7Z5P4 300 aaPredicted RBP12.28□□□□□ -0.44
VAPA-204ENST00000577901 Q8N402 240 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 OR1L8Q8NGR8 309 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 DLX4Q92988 240 aaPredicted RBP12.28□□□□□ -0.44
VAPA-204ENST00000577901 QTRT1Q9BXR0 403 aaKnown RBP12.28□□□□□ -0.44
VAPA-204ENST00000577901 ZMAT4Q9H898 229 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 AKIP1Q9NQ31 210 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 PEF1Q9UBV8 284 aaKnown RBP12.28□□□□□ -0.44
VAPA-204ENST00000577901 PRNDQ9UKY0 176 aa12.28□□□□□ -0.44
VAPA-204ENST00000577901 TEX50A0A1B0GTY4 177 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 A0A1B0GW64 132 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 GP9P14770 177 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 AREGP15514 252 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 HIST1H1BP16401 226 aaKnown RBP12.27□□□□□ -0.45
VAPA-204ENST00000577901 CTRB1P17538 263 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 FAUP35544 74 aaKnown RBP12.27□□□□□ -0.45
VAPA-204ENST00000577901 AP3S2P59780 193 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 ZNF45Q02386 682 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 FAM209BQ5JX69 171 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 CTRB2Q6GPI1 263 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 CCDC190Q86UF4 302 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 OR51S1Q8NGJ8 323 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 SCGB3A2Q96PL1 93 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 PALMDQ9NP74 551 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 MCUBQ9NWR8 336 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 OR51B2Q9Y5P1 312 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 V9GYH0 126 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 TNCP24821 2201 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 CSMD3Q7Z407 3707 aa12.27□□□□□ -0.45
VAPA-204ENST00000577901 CGB1A6NKQ9 187 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 CYB5BO43169 146 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 OR2J3O76001 311 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 DEFA5Q01523 94 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 TRIM16LQ309B1 348 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 TOMM5Q8N4H5 51 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 OR6Q1Q8NGQ2 317 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 OR4A16Q8NH70 328 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 MRGPRFQ96AM1 343 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 SEC22AQ96IW7 307 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 TP53RKQ96S44 253 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 GAR1Q9NY12 217 aaKnown RBP12.26□□□□□ -0.45
VAPA-204ENST00000577901 SLC2A8Q9NY64 477 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 FBXL7Q9UJT9 491 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 GPR132Q9UNW8 380 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 NSG2Q9Y328 171 aa12.26□□□□□ -0.45
VAPA-204ENST00000577901 TEX13DA0A0J9YY54 714 aaPredicted RBP12.25□□□□□ -0.45
VAPA-204ENST00000577901 IGKV1-39P01597 117 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 IGKV1D-39P04432 117 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 REG1AP05451 166 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 ETV6P41212 452 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 TATDN3Q17R31 274 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 C15orf32Q32M92 178 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 GDPD1Q8N9F7 314 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 OR5B3Q8NH48 314 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 TMEM56Q96MV1 263 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 RTBDNQ9BSG5 229 aaPredicted RBP12.25□□□□□ -0.45
VAPA-204ENST00000577901 HINT2Q9BX68 163 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 NDUFA4L2Q9NRX3 87 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 THYN1Q9P016 225 aa12.25□□□□□ -0.45
VAPA-204ENST00000577901 LCE6AA0A183 80 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 IGLC7A0M8Q6 106 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 C15orf61A6NNL5 157 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 RBMXL2O75526 392 aaKnown RBP12.24□□□□□ -0.45
VAPA-204ENST00000577901 EXOSC2Q13868 293 aaKnown RBP12.24□□□□□ -0.45
VAPA-204ENST00000577901 ZNF79Q15937 498 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms