RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 C5orf24Q7Z6I8 188 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 GRAMD2BQ96HH9 432 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 VSIRQ9H7M9 311 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 PINLYPA6NC86 204 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 HOXA4Q00056 320 aaPredicted RBP9.16□□□□□ -0.94
RNF43-203ENST00000577716 ZNF324BQ6AW86 544 aaPredicted RBP9.16□□□□□ -0.94
RNF43-203ENST00000577716 OR4A47Q6IF82 309 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 ZNF581Q9P0T4 197 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 HSPB7Q9UBY9 170 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 TRBV9A0A0B4J1U6 114 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 ATXN7O15265 892 aaPredicted RBP9.16□□□□□ -0.94
RNF43-203ENST00000577716 SIAH2O43255 324 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 OTX1P32242 354 aaPredicted RBP9.16□□□□□ -0.94
RNF43-203ENST00000577716 IL36BQ9NZH7 164 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 LOC102724200A0A096LPH7 203 aaPredicted RBP9.16□□□□□ -0.94
RNF43-203ENST00000577716 IQCF6A8MYZ5 107 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 FOLR2P14207 255 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 ATP5IP56385 69 aaPredicted RBP9.16□□□□□ -0.94
RNF43-203ENST00000577716 ZNF497Q6ZNH5 498 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 GGNQ86UU5 652 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 OR9G1Q8NH87 305 aa9.16□□□□□ -0.94
RNF43-203ENST00000577716 F2RL2O00254 374 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 CDX4O14627 284 aaPredicted RBP9.15□□□□□ -0.94
RNF43-203ENST00000577716 CXCL1P09341 107 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 C1QTNF9P0C862 333 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 SP9P0CG40 484 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 GATA2P23769 480 aaPredicted RBP9.15□□□□□ -0.94
RNF43-203ENST00000577716 ERVFRD-1P60508 538 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 ZFP36L1Q07352 338 aaKnown RBP9.15□□□□□ -0.94
RNF43-203ENST00000577716 ECSCRQ19T08 205 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 MBD3L1Q8WWY6 194 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 MRPL32Q9BYC8 188 aaKnown RBP9.15□□□□□ -0.94
RNF43-203ENST00000577716 MOSP00540 346 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 TFF1P04155 84 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 TNFSF10P50591 281 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 FOXA3P55318 350 aaPredicted RBP9.15□□□□□ -0.94
RNF43-203ENST00000577716 HERPUD1Q15011 391 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 ZNF788Q6ZQV5 615 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 FAM216BQ8N7L0 139 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 SLC25A33Q9BSK2 321 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 CDC42EP3Q9UKI2 254 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 FRMPD3Q5JV73 1810 aa9.15□□□□□ -0.94
RNF43-203ENST00000577716 A6NDN8 102 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 WISP1O95388 367 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 SCGB1C2P0DMR2 95 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 CD40P25942 277 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 CFPP27918 469 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 Q1RN00 199 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 NMSQ5H8A3 153 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 TIMM23BQ5SRD1 257 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 PEAR1Q5VY43 1037 aaPredicted RBP9.15□□□□□ -0.95
RNF43-203ENST00000577716 CCDC144NLQ6NUI1 221 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 TMEM171Q8WVE6 324 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 SRSF12Q8WXF0 261 aaKnown RBP9.15□□□□□ -0.95
RNF43-203ENST00000577716 TMEM186Q96B77 213 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 ZNF524Q96C55 264 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 IGHV2OR16-5A0A0B4J2B6 119 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 PGPEP1LA6NFU8 196 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 OR4A5Q8NH83 315 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 IFI27L2Q9H2X8 130 aa9.15□□□□□ -0.95
RNF43-203ENST00000577716 TMEM189A5PLL7 270 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 CTAG1AP78358 180 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 COTL1Q14019 142 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 TMEM30BQ3MIR4 351 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 MUC15Q8N387 334 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 WDR31Q8NA23 367 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 PLXNA4Q9HCM2 1894 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 CEP350Q5VT06 3117 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 FCGR2BP31994 310 aaPredicted RBP9.14□□□□□ -0.95
RNF43-203ENST00000577716 GPX4P36969 197 aaPredicted RBP9.14□□□□□ -0.95
RNF43-203ENST00000577716 GFI1BQ5VTD9 330 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 OSR1Q8TAX0 266 aaPredicted RBP9.14□□□□□ -0.95
RNF43-203ENST00000577716 NEU1Q99519 415 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 BDP1A6H8Y1 2624 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 IGKV3D-15A0A087WSY6 115 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 DPRXA6NFQ7 191 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 C9orf172C9J069 976 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 NDUFA2O43678 99 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 NMUP48645 174 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 MIR17HGQ75NE6 70 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 TMEM170AQ8WVE7 144 aa9.14□□□□□ -0.95
RNF43-203ENST00000577716 TRBV24-1A0A075B6N3 115 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 ZNF883P0CG24 379 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 GOLT1AQ6ZVE7 132 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 KBTBD11-OT1A0A1B0GTJ5 212 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 FAM27E3Q08E93 113 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 GCSAMLQ5JQS6 135 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 SCGB1D4Q6XE38 83 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 TCF23Q7RTU1 214 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 LINC00305Q7Z4B0 112 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 C1orf162Q8NEQ5 155 aaPredicted RBP9.13□□□□□ -0.95
RNF43-203ENST00000577716 WDR83OSQ9Y284 106 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 TBL2Q9Y4P3 447 aaKnown RBP9.13□□□□□ -0.95
RNF43-203ENST00000577716 C9JQL5 133 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 CCL21O00585 134 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 NBEAP1P0C6P0 100 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 CKS2P33552 79 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 TMEM42Q69YG0 159 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 WDR82Q6UXN9 313 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 ZNF600Q6ZNG1 722 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms