RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 OGFRL1Q5TC84 451 aaPredicted RBP0.54□□□□□ -2.32
TOP2A-202ENST00000577541 PTRHD1Q6GMV3 140 aaKnown RBP0.54□□□□□ -2.32
TOP2A-202ENST00000577541 C5orf46Q6UWT4 87 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 ZNF705AQ6ZN79 300 aaPredicted RBP0.54□□□□□ -2.32
TOP2A-202ENST00000577541 C7orf65Q6ZTY9 151 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 SLC36A1Q7Z2H8 476 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 ZNF565Q8N9K5 539 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 ZNF563Q8TA94 476 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 JOSD2Q8TAC2 188 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 RASSF5Q8WWW0 418 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 ACOT12Q8WYK0 555 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 OPTNQ96CV9 577 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 MRPS24Q96EL2 167 aaKnown RBP0.54□□□□□ -2.32
TOP2A-202ENST00000577541 CNBD2Q96M20 576 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 DERL1Q9BUN8 251 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 MRPL32Q9BYC8 188 aaKnown RBP0.54□□□□□ -2.32
TOP2A-202ENST00000577541 WDR61Q9GZS3 305 aaKnown RBP0.54□□□□□ -2.32
TOP2A-202ENST00000577541 NDUFB11Q9NX14 153 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 IL36BQ9NZH7 164 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 RALGAPA2Q2PPJ7 1873 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 DCCP43146 1447 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 NUP160Q12769 1436 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 SETD5Q9C0A6 1442 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 PTPRSQ13332 1948 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 PLB1Q6P1J6 1458 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 BAZ2BQ9UIF8 2168 aaKnown RBP0.53□□□□□ -2.32
TOP2A-202ENST00000577541 PRRC2BQ5JSZ5 2229 aaKnown RBP0.53□□□□□ -2.32
TOP2A-202ENST00000577541 CCDC88AQ3V6T2 1871 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 TRBV20OR9-2A0A075B6H5 130 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 IGKV1D-42A0A075B6H8 117 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 OR51F1A6NGY5 319 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 SMIM9A6NGZ8 99 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 CNIH1O95406 144 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 IGHV3-7P01780 117 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 APOEP02649 317 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 IFNA16P05015 189 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 SRP19P09132 144 aaKnown RBP0.53□□□□□ -2.32
TOP2A-202ENST00000577541 CRYGAP11844 174 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 MYL12AP19105 171 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 HIST1H1TP22492 207 aaPredicted RBP0.53□□□□□ -2.32
TOP2A-202ENST00000577541 MSNP26038 577 aaKnown RBP0.53□□□□□ -2.32
TOP2A-202ENST00000577541 FXYD7P58549 80 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 SPCS3P61009 180 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 TMEM258P61165 79 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 ARHGAP11BQ3KRB8 267 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 HSP90B2PQ58FF3 399 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 AADACL3Q5VUY0 350 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 Q6ZS49 121 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 Q6ZSA8 131 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 S100A7AQ86SG5 101 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 Q8N2B8 174 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 ZNF676Q8N7Q3 588 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 C8orf76Q96K31 380 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 CHST6Q9GZX3 395 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 RNASE7Q9H1E1 156 aaKnown RBP0.53□□□□□ -2.32
TOP2A-202ENST00000577541 UCK1Q9HA47 277 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 MRPL27Q9P0M9 148 aaKnown RBP0.53□□□□□ -2.32
TOP2A-202ENST00000577541 GREB1Q4ZG55 1949 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 PTPRBP23467 1997 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 TONSLQ96HA7 1378 aa0.53□□□□□ -2.32
TOP2A-202ENST00000577541 COL4A5P29400 1685 aa0.53□□□□□ -2.33
TOP2A-202ENST00000577541 A0A087WUJ7 227 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 MEIS3P1A6NDR6 274 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 CLDN24A6NM45 220 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 KPNA3O00505 521 aaPredicted RBP0.52□□□□□ -2.33
TOP2A-202ENST00000577541 ORC5O43913 435 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 UCHL1P09936 223 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 OR5G3P0C626 314 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 TRGC1P0CF51 173 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 LYNX1P0DP58 116 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 UCHL3P15374 230 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 ERVS71-1P61550 626 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 SNRPD2P62316 118 aaKnown RBP0.52□□□□□ -2.33
TOP2A-202ENST00000577541 GLO1Q04760 184 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 AESQ08117 197 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 Q1T7F1 81 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 HIST2H3PS2Q5TEC6 136 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 LPCAT3Q6P1A2 487 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 FP248Q71RG6 208 aaPredicted RBP0.52□□□□□ -2.33
TOP2A-202ENST00000577541 DCXRQ7Z4W1 244 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 RPP25LQ8N5L8 163 aaKnown RBP0.52□□□□□ -2.33
TOP2A-202ENST00000577541 TBC1D19Q8N5T2 526 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 CLDN22Q8N7P3 220 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 OR8B12Q8NGG6 310 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 PRAP1Q96NZ9 151 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 TSPAN32Q96QS1 320 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 C14orf105Q9NVL8 296 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 FBXL12Q9NXK8 326 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 AK3Q9UIJ7 227 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 TIMM9Q9Y5J7 89 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 LHFPL6Q9Y693 200 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 PCF11O94913 1555 aaKnown RBP0.52□□□□□ -2.33
TOP2A-202ENST00000577541 COL6A6A6NMZ7 2263 aa0.52□□□□□ -2.33
TOP2A-202ENST00000577541 TRAV26-2A0A0B4J265 109 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 TRBV6-5A0A0K0K1A5 114 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 OR4C46A6NHA9 309 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 TMEM212A6NML5 194 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 DCTN3O75935 186 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 OR2J2O76002 312 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 HLA-DRB1P01911 266 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms